Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 CR383656.3-201ENST00000551315 183 ntBASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 AL139339.2-201ENST00000608063 657 ntBASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 AL627230.2-201ENST00000613254 655 ntBASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 AL451007.2-201ENST00000632004 563 ntBASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 AL603764.1-201ENST00000636452 321 ntBASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 AL008718.2-201ENST00000609206 1313 ntBASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 AL354861.1-201ENST00000445213 355 ntBASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 AC244197.1-201ENST00000456494 951 ntBASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 AC055811.3-201ENST00000584952 686 ntBASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 AC004466.1-201ENST00000599515 1080 ntBASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 AC021016.3-201ENST00000608367 477 ntBASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 AC055811.4-201ENST00000624039 1754 ntBASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 AP000593.2-201ENST00000542775 1433 ntBASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.57□□□□□ -0.08
RSPO4Q2I0M5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.56□□□□□ -0.08
RSPO4Q2I0M5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms