Protein–RNA interactions for Protein: Q0P6D6

CCDC15, Coiled-coil domain-containing protein 15, humanhuman

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC15Q0P6D6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CCDC15Q0P6D6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC15Q0P6D6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC15Q0P6D6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC15Q0P6D6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC15Q0P6D6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC15Q0P6D6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC15Q0P6D6 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC15Q0P6D6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC15Q0P6D6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC15Q0P6D6 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC15Q0P6D6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC15Q0P6D6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC15Q0P6D6 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC15Q0P6D6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC15Q0P6D6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 OR8S1-201ENST00000310194 1080 ntBASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 AL162726.2-201ENST00000438986 1017 ntBASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 ENPP7P5-201ENST00000541031 1031 ntBASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 AC106886.1-201ENST00000568660 600 ntBASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 AC015936.2-201ENST00000593177 259 ntBASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC15Q0P6D6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 AC074338.1-201ENST00000416825 156 ntBASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 KRT18P43-201ENST00000469825 1281 ntBASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 WASH4P-201ENST00000564273 1246 ntBASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 CTBP2P3-201ENST00000585629 1255 ntBASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 AL391069.4-201ENST00000609583 481 ntBASIC15.81■□□□□ 0.12
CCDC15Q0P6D6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms