Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CACNA1BQ00975 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CACNA1BQ00975 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CACNA1BQ00975 AP001282.1-201ENST00000531301 1499 ntBASIC13.87□□□□□ -0.19
CACNA1BQ00975 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.87□□□□□ -0.19
CACNA1BQ00975 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 RPS18P9-201ENST00000482817 460 ntBASIC13.86□□□□□ -0.19
CACNA1BQ00975 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 KNOP1P1-201ENST00000542108 989 ntBASIC13.86□□□□□ -0.19
CACNA1BQ00975 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 HNRNPA1P16-201ENST00000575692 955 ntBASIC13.86□□□□□ -0.19
CACNA1BQ00975 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 MIR6819-201ENST00000622122 61 ntBASIC13.86□□□□□ -0.19
CACNA1BQ00975 CROCCP2-202ENST00000412962 2773 ntBASIC13.86□□□□□ -0.19
CACNA1BQ00975 AL008638.4-201ENST00000624792 1315 ntBASIC13.86□□□□□ -0.19
CACNA1BQ00975 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 AC008764.6-201ENST00000595909 2069 ntBASIC13.86□□□□□ -0.19
CACNA1BQ00975 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 EIF3FP3-201ENST00000434851 1086 ntBASIC13.86□□□□□ -0.19
CACNA1BQ00975 AC012441.2-201ENST00000444843 739 ntBASIC13.86□□□□□ -0.19
CACNA1BQ00975 TPST2P1-201ENST00000564073 1102 ntBASIC13.86□□□□□ -0.19
CACNA1BQ00975 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 RPL4P6-201ENST00000438116 1304 ntBASIC13.86□□□□□ -0.19
CACNA1BQ00975 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CACNA1BQ00975 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CACNA1BQ00975 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 ORAOV1P1-201ENST00000503108 395 ntBASIC13.85□□□□□ -0.19
CACNA1BQ00975 MESTP3-201ENST00000503460 968 ntBASIC13.85□□□□□ -0.19
CACNA1BQ00975 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 AC010976.2-201ENST00000609697 852 ntBASIC13.85□□□□□ -0.19
CACNA1BQ00975 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC13.85□□□□□ -0.19
CACNA1BQ00975 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 AL158070.2-201ENST00000623713 1621 ntBASIC13.85□□□□□ -0.19
CACNA1BQ00975 AC244394.1-201ENST00000435000 1665 ntBASIC13.85□□□□□ -0.19
CACNA1BQ00975 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CACNA1BQ00975 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.85□□□□□ -0.19
CACNA1BQ00975 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms