Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CNTNAP1P78357 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CNTNAP1P78357 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CNTNAP1P78357 SERBP1P2-201ENST00000436888 1164 ntBASIC17.78■□□□□ 0.44
CNTNAP1P78357 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.78■□□□□ 0.44
CNTNAP1P78357 CHCHD2P9-201ENST00000461726 456 ntBASIC17.78■□□□□ 0.44
CNTNAP1P78357 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.78■□□□□ 0.44
CNTNAP1P78357 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.78■□□□□ 0.44
CNTNAP1P78357 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.78■□□□□ 0.44
CNTNAP1P78357 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.78■□□□□ 0.44
CNTNAP1P78357 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNTNAP1P78357 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CNTNAP1P78357 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.77■□□□□ 0.44
CNTNAP1P78357 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP1P78357 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP1P78357 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP1P78357 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP1P78357 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP1P78357 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.77■□□□□ 0.44
CNTNAP1P78357 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP1P78357 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.77■□□□□ 0.44
CNTNAP1P78357 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP1P78357 AC012508.2-201ENST00000567613 1472 ntBASIC17.77■□□□□ 0.44
CNTNAP1P78357 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP1P78357 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.77■□□□□ 0.44
CNTNAP1P78357 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.77■□□□□ 0.44
CNTNAP1P78357 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNTNAP1P78357 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNTNAP1P78357 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CNTNAP1P78357 AL118508.1-201ENST00000613502 2345 ntBASIC17.77■□□□□ 0.43
CNTNAP1P78357 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CNTNAP1P78357 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC17.77■□□□□ 0.43
CNTNAP1P78357 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
CNTNAP1P78357 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNTNAP1P78357 AL357563.1-201ENST00000404728 395 ntBASIC17.77■□□□□ 0.43
CNTNAP1P78357 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC17.77■□□□□ 0.43
CNTNAP1P78357 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.77■□□□□ 0.43
CNTNAP1P78357 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC17.77■□□□□ 0.43
CNTNAP1P78357 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC17.77■□□□□ 0.43
CNTNAP1P78357 NDUFS6P1-201ENST00000485187 316 ntBASIC17.77■□□□□ 0.43
CNTNAP1P78357 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CNTNAP1P78357 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.77■□□□□ 0.43
CNTNAP1P78357 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.77■□□□□ 0.43
CNTNAP1P78357 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.43
CNTNAP1P78357 AC087392.5-201ENST00000612517 489 ntBASIC17.77■□□□□ 0.43
CNTNAP1P78357 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CNTNAP1P78357 AL513523.2-202ENST00000427283 2040 ntBASIC17.77■□□□□ 0.43
CNTNAP1P78357 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CNTNAP1P78357 AC099398.1-201ENST00000567919 2776 ntBASIC17.77■□□□□ 0.43
CNTNAP1P78357 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CNTNAP1P78357 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 AC026320.2-201ENST00000434379 478 ntBASIC17.76■□□□□ 0.43
CNTNAP1P78357 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 AC107464.3-201ENST00000609172 737 ntBASIC17.76■□□□□ 0.43
CNTNAP1P78357 MEG3_2.1-201ENST00000611456 105 ntBASIC17.76■□□□□ 0.43
CNTNAP1P78357 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 AC138466.5-201ENST00000624002 808 ntBASIC17.76■□□□□ 0.43
CNTNAP1P78357 AC005618.3-201ENST00000624928 458 ntBASIC17.76■□□□□ 0.43
CNTNAP1P78357 Z98259.2-201ENST00000641583 609 ntBASIC17.76■□□□□ 0.43
CNTNAP1P78357 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 MBLAC2-202ENST00000514906 1936 ntBASIC17.76■□□□□ 0.43
CNTNAP1P78357 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNTNAP1P78357 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CNTNAP1P78357 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNTNAP1P78357 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.75■□□□□ 0.43
CNTNAP1P78357 PRAL-201ENST00000624952 3286 ntBASIC17.75■□□□□ 0.43
CNTNAP1P78357 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.75■□□□□ 0.43
CNTNAP1P78357 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CNTNAP1P78357 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNTNAP1P78357 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms