Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCR4P61073 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CXCR4P61073 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.9□□□□□ -0.18
CXCR4P61073 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CXCR4P61073 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CXCR4P61073 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CXCR4P61073 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CXCR4P61073 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 AC004945.1-201ENST00000416738 983 ntBASIC13.9□□□□□ -0.18
CXCR4P61073 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.9□□□□□ -0.18
CXCR4P61073 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.9□□□□□ -0.18
CXCR4P61073 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.9□□□□□ -0.18
CXCR4P61073 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.9□□□□□ -0.18
CXCR4P61073 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.9□□□□□ -0.18
CXCR4P61073 SLC25A1P1-201ENST00000528351 927 ntBASIC13.9□□□□□ -0.18
CXCR4P61073 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.9□□□□□ -0.18
CXCR4P61073 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.9□□□□□ -0.18
CXCR4P61073 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.9□□□□□ -0.18
CXCR4P61073 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.9□□□□□ -0.18
CXCR4P61073 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.9□□□□□ -0.18
CXCR4P61073 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.9□□□□□ -0.18
CXCR4P61073 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CXCR4P61073 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CXCR4P61073 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CXCR4P61073 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CXCR4P61073 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CXCR4P61073 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CXCR4P61073 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.9□□□□□ -0.18
CXCR4P61073 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.9□□□□□ -0.18
CXCR4P61073 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.9□□□□□ -0.18
CXCR4P61073 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CXCR4P61073 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CXCR4P61073 AC090505.1-201ENST00000430515 1834 ntBASIC13.9□□□□□ -0.18
CXCR4P61073 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCR4P61073 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
CXCR4P61073 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
CXCR4P61073 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
CXCR4P61073 UXT-AS1-201ENST00000590504 1525 ntBASIC13.9□□□□□ -0.19
CXCR4P61073 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.9□□□□□ -0.19
CXCR4P61073 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCR4P61073 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCR4P61073 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCR4P61073 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCR4P61073 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CXCR4P61073 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CXCR4P61073 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCR4P61073 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CXCR4P61073 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.89□□□□□ -0.19
CXCR4P61073 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCR4P61073 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CXCR4P61073 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CXCR4P61073 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCR4P61073 LILRP1-201ENST00000444199 1370 ntBASIC13.89□□□□□ -0.19
CXCR4P61073 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CXCR4P61073 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CXCR4P61073 AC023274.1-201ENST00000418278 595 ntBASIC13.89□□□□□ -0.19
CXCR4P61073 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.89□□□□□ -0.19
CXCR4P61073 TIMM8BP1-201ENST00000452384 211 ntBASIC13.89□□□□□ -0.19
CXCR4P61073 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
CXCR4P61073 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CXCR4P61073 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.89□□□□□ -0.19
CXCR4P61073 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.89□□□□□ -0.19
CXCR4P61073 AC106730.1-201ENST00000566722 1090 ntBASIC13.89□□□□□ -0.19
CXCR4P61073 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.89□□□□□ -0.19
CXCR4P61073 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.89□□□□□ -0.19
CXCR4P61073 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CXCR4P61073 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CXCR4P61073 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CXCR4P61073 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.89□□□□□ -0.19
CXCR4P61073 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CXCR4P61073 AC087386.2-201ENST00000623212 4637 ntBASIC13.89□□□□□ -0.19
CXCR4P61073 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.89□□□□□ -0.19
CXCR4P61073 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CXCR4P61073 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms