Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.64□□□□□ -0.23
CLRN1P58418 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.64□□□□□ -0.23
CLRN1P58418 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.64□□□□□ -0.23
CLRN1P58418 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLRN1P58418 AC107373.2-201ENST00000607735 490 ntBASIC13.64□□□□□ -0.23
CLRN1P58418 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.64□□□□□ -0.23
CLRN1P58418 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLRN1P58418 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLRN1P58418 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.64□□□□□ -0.23
CLRN1P58418 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLRN1P58418 AL359258.3-201ENST00000622910 2331 ntBASIC13.64□□□□□ -0.23
CLRN1P58418 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CLRN1P58418 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLRN1P58418 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CLRN1P58418 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLRN1P58418 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLRN1P58418 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLRN1P58418 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLRN1P58418 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLRN1P58418 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CLRN1P58418 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLRN1P58418 AJ011931.1-201ENST00000618749 2492 ntBASIC13.64□□□□□ -0.23
CLRN1P58418 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLRN1P58418 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.64□□□□□ -0.23
CLRN1P58418 AC013726.1-201ENST00000563747 2285 ntBASIC13.64□□□□□ -0.23
CLRN1P58418 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLRN1P58418 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLRN1P58418 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLRN1P58418 ACE3P-201ENST00000423435 1973 ntBASIC13.63□□□□□ -0.23
CLRN1P58418 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.63□□□□□ -0.23
CLRN1P58418 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CLRN1P58418 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.63□□□□□ -0.23
CLRN1P58418 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.63□□□□□ -0.23
CLRN1P58418 TSPY16P-201ENST00000449843 468 ntBASIC13.63□□□□□ -0.23
CLRN1P58418 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CLRN1P58418 SERBP1P5-201ENST00000510079 1181 ntBASIC13.63□□□□□ -0.23
CLRN1P58418 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.63□□□□□ -0.23
CLRN1P58418 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.63□□□□□ -0.23
CLRN1P58418 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.63□□□□□ -0.23
CLRN1P58418 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.63□□□□□ -0.23
CLRN1P58418 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.63□□□□□ -0.23
CLRN1P58418 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.63□□□□□ -0.23
CLRN1P58418 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.63□□□□□ -0.23
CLRN1P58418 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.63□□□□□ -0.23
CLRN1P58418 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.63□□□□□ -0.23
CLRN1P58418 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.63□□□□□ -0.23
CLRN1P58418 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
CLRN1P58418 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 DRD5P1-201ENST00000456605 1438 ntBASIC13.63□□□□□ -0.23
CLRN1P58418 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLRN1P58418 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CLRN1P58418 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.62□□□□□ -0.23
CLRN1P58418 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.62□□□□□ -0.23
CLRN1P58418 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.62□□□□□ -0.23
CLRN1P58418 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
CLRN1P58418 SLC7A15P-201ENST00000424028 1363 ntBASIC13.62□□□□□ -0.23
CLRN1P58418 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLRN1P58418 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
CLRN1P58418 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLRN1P58418 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.62□□□□□ -0.23
CLRN1P58418 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.62□□□□□ -0.23
CLRN1P58418 DFFBP1-201ENST00000433250 979 ntBASIC13.62□□□□□ -0.23
CLRN1P58418 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms