Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN8P56748 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CLDN8P56748 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.47□□□□□ -0.09
CLDN8P56748 MIR943-201ENST00000401286 94 ntBASIC14.47□□□□□ -0.09
CLDN8P56748 MIR1233-2-201ENST00000408138 82 ntBASIC14.47□□□□□ -0.09
CLDN8P56748 MIR1233-1-201ENST00000408722 82 ntBASIC14.47□□□□□ -0.09
CLDN8P56748 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN8P56748 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.47□□□□□ -0.09
CLDN8P56748 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN8P56748 AL589987.1-201ENST00000453380 819 ntBASIC14.47□□□□□ -0.09
CLDN8P56748 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN8P56748 TPT1P11-201ENST00000458482 498 ntBASIC14.47□□□□□ -0.09
CLDN8P56748 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN8P56748 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
CLDN8P56748 AC026410.3-201ENST00000514280 936 ntBASIC14.47□□□□□ -0.09
CLDN8P56748 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.47□□□□□ -0.09
CLDN8P56748 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN8P56748 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.47□□□□□ -0.09
CLDN8P56748 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.47□□□□□ -0.09
CLDN8P56748 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN8P56748 AL691403.2-201ENST00000618460 490 ntBASIC14.47□□□□□ -0.09
CLDN8P56748 AC093028.1-201ENST00000622998 982 ntBASIC14.47□□□□□ -0.09
CLDN8P56748 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN8P56748 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN8P56748 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLDN8P56748 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
CLDN8P56748 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CLDN8P56748 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN8P56748 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN8P56748 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN8P56748 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.47□□□□□ -0.09
CLDN8P56748 AL158070.2-201ENST00000623713 1621 ntBASIC14.47□□□□□ -0.09
CLDN8P56748 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN8P56748 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN8P56748 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN8P56748 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN8P56748 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN8P56748 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN8P56748 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CLDN8P56748 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN8P56748 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
CLDN8P56748 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN8P56748 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CLDN8P56748 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN8P56748 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLDN8P56748 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDN8P56748 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CLDN8P56748 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CLDN8P56748 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CLDN8P56748 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLDN8P56748 AL138799.1-201ENST00000448213 1675 ntBASIC14.46□□□□□ -0.09
CLDN8P56748 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN8P56748 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDN8P56748 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
CLDN8P56748 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLDN8P56748 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLDN8P56748 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN8P56748 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDN8P56748 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDN8P56748 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
CLDN8P56748 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN8P56748 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN8P56748 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDN8P56748 RARRES2P5-201ENST00000564013 466 ntBASIC14.46□□□□□ -0.09
CLDN8P56748 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CLDN8P56748 AC023090.2-201ENST00000625182 2110 ntBASIC14.46□□□□□ -0.09
CLDN8P56748 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
CLDN8P56748 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN8P56748 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN8P56748 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN8P56748 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.46□□□□□ -0.1
CLDN8P56748 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN8P56748 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.46□□□□□ -0.1
CLDN8P56748 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CLDN8P56748 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.46□□□□□ -0.1
CLDN8P56748 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CLDN8P56748 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN8P56748 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CLDN8P56748 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.46□□□□□ -0.1
CLDN8P56748 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CLDN8P56748 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN8P56748 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms