Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 AF228730.5-201ENST00000530288 346 ntBASIC15.31■□□□□ 0.04
MDH1P40925 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.31■□□□□ 0.04
MDH1P40925 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.31■□□□□ 0.04
MDH1P40925 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.31■□□□□ 0.04
MDH1P40925 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 AP000550.4-202ENST00000639755 178 ntBASIC15.31■□□□□ 0.04
MDH1P40925 AL645728.2-202ENST00000641679 227 ntBASIC15.31■□□□□ 0.04
MDH1P40925 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MDH1P40925 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 AC020910.6-201ENST00000623084 1459 ntBASIC15.31■□□□□ 0.04
MDH1P40925 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
MDH1P40925 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MDH1P40925 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MDH1P40925 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MDH1P40925 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
MDH1P40925 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MDH1P40925 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
MDH1P40925 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MDH1P40925 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 AC007326.2-201ENST00000624224 7579 ntBASIC15.3■□□□□ 0.04
MDH1P40925 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MDH1P40925 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MDH1P40925 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC15.3■□□□□ 0.04
MDH1P40925 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.3■□□□□ 0.04
MDH1P40925 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.3■□□□□ 0.04
MDH1P40925 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.3■□□□□ 0.04
MDH1P40925 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.3■□□□□ 0.04
MDH1P40925 IGLL3P-201ENST00000412472 434 ntBASIC15.3■□□□□ 0.04
MDH1P40925 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.3■□□□□ 0.04
MDH1P40925 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.3■□□□□ 0.04
MDH1P40925 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.3■□□□□ 0.04
MDH1P40925 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.3■□□□□ 0.04
MDH1P40925 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
MDH1P40925 RNA5SP410-201ENST00000516285 106 ntBASIC15.3■□□□□ 0.04
MDH1P40925 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.3■□□□□ 0.04
MDH1P40925 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.3■□□□□ 0.04
MDH1P40925 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.3■□□□□ 0.04
MDH1P40925 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.3■□□□□ 0.04
MDH1P40925 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.3■□□□□ 0.04
MDH1P40925 MIR4751-201ENST00000578027 74 ntBASIC15.3■□□□□ 0.04
MDH1P40925 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.3■□□□□ 0.04
MDH1P40925 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.3■□□□□ 0.04
MDH1P40925 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.3■□□□□ 0.04
MDH1P40925 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MDH1P40925 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MDH1P40925 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MDH1P40925 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MDH1P40925 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
MDH1P40925 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MDH1P40925 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
MDH1P40925 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
MDH1P40925 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.29■□□□□ 0.04
MDH1P40925 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MDH1P40925 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.29■□□□□ 0.04
MDH1P40925 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.29■□□□□ 0.04
MDH1P40925 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MDH1P40925 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.29■□□□□ 0.04
MDH1P40925 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
MDH1P40925 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.29■□□□□ 0.04
MDH1P40925 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MDH1P40925 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MDH1P40925 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MDH1P40925 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
MDH1P40925 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MDH1P40925 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MDH1P40925 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MDH1P40925 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MDH1P40925 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
MDH1P40925 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms