Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.56□□□□□ -0.08
KRT20P35900 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.56□□□□□ -0.08
KRT20P35900 AL390955.2-201ENST00000603032 514 ntBASIC14.56□□□□□ -0.08
KRT20P35900 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.56□□□□□ -0.08
KRT20P35900 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.56□□□□□ -0.08
KRT20P35900 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
KRT20P35900 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.56□□□□□ -0.08
KRT20P35900 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
KRT20P35900 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
KRT20P35900 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.56□□□□□ -0.08
KRT20P35900 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.56□□□□□ -0.08
KRT20P35900 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
KRT20P35900 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
KRT20P35900 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.55□□□□□ -0.08
KRT20P35900 AC005840.4-201ENST00000541242 2494 ntBASIC14.55□□□□□ -0.08
KRT20P35900 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
KRT20P35900 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.55□□□□□ -0.08
KRT20P35900 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.55□□□□□ -0.08
KRT20P35900 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.55□□□□□ -0.08
KRT20P35900 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.55□□□□□ -0.08
KRT20P35900 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.55□□□□□ -0.08
KRT20P35900 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.55□□□□□ -0.08
KRT20P35900 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.55□□□□□ -0.08
KRT20P35900 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.55□□□□□ -0.08
KRT20P35900 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.55□□□□□ -0.08
KRT20P35900 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.55□□□□□ -0.08
KRT20P35900 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
KRT20P35900 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
KRT20P35900 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
KRT20P35900 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
KRT20P35900 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
KRT20P35900 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
KRT20P35900 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
KRT20P35900 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
KRT20P35900 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
KRT20P35900 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
KRT20P35900 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT20P35900 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
KRT20P35900 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT20P35900 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT20P35900 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.54□□□□□ -0.08
KRT20P35900 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
KRT20P35900 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.54□□□□□ -0.08
KRT20P35900 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT20P35900 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT20P35900 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
KRT20P35900 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
KRT20P35900 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.54□□□□□ -0.08
KRT20P35900 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
KRT20P35900 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT20P35900 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT20P35900 AC009477.1-201ENST00000452936 217 ntBASIC14.54□□□□□ -0.08
KRT20P35900 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT20P35900 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT20P35900 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
KRT20P35900 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.54□□□□□ -0.08
KRT20P35900 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.54□□□□□ -0.08
KRT20P35900 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.54□□□□□ -0.08
KRT20P35900 AJ011932.1-201ENST00000621707 465 ntBASIC14.54□□□□□ -0.08
KRT20P35900 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms