Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.66■□□□□ 0.1
HOXC13P31276 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
HOXC13P31276 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC13P31276 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 KRT18P25-201ENST00000508931 1278 ntBASIC15.66■□□□□ 0.1
HOXC13P31276 AC022616.1-201ENST00000518688 554 ntBASIC15.66■□□□□ 0.1
HOXC13P31276 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.66■□□□□ 0.1
HOXC13P31276 CHMP4BP1-201ENST00000556017 588 ntBASIC15.66■□□□□ 0.1
HOXC13P31276 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.66■□□□□ 0.1
HOXC13P31276 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC13P31276 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXC13P31276 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC13P31276 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXC13P31276 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HOXC13P31276 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HOXC13P31276 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HOXC13P31276 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.66■□□□□ 0.1
HOXC13P31276 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HOXC13P31276 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.66■□□□□ 0.1
HOXC13P31276 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
HOXC13P31276 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC13P31276 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC13P31276 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC13P31276 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC13P31276 AL137783.1-201ENST00000623494 1896 ntBASIC15.65■□□□□ 0.1
HOXC13P31276 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC13P31276 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HOXC13P31276 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC13P31276 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC13P31276 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXC13P31276 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC13P31276 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC13P31276 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXC13P31276 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HOXC13P31276 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HOXC13P31276 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HOXC13P31276 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.65■□□□□ 0.1
HOXC13P31276 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXC13P31276 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.65■□□□□ 0.1
HOXC13P31276 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.65■□□□□ 0.1
HOXC13P31276 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC13P31276 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.65■□□□□ 0.1
HOXC13P31276 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC13P31276 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXC13P31276 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HOXC13P31276 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.65■□□□□ 0.1
HOXC13P31276 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXC13P31276 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXC13P31276 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.65■□□□□ 0.1
HOXC13P31276 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC13P31276 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC13P31276 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXC13P31276 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.65■□□□□ 0.1
HOXC13P31276 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC13P31276 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HOXC13P31276 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
HOXC13P31276 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.64■□□□□ 0.1
HOXC13P31276 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC13P31276 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC13P31276 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC13P31276 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC13P31276 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC13P31276 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC13P31276 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC13P31276 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HOXC13P31276 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC13P31276 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
HOXC13P31276 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC13P31276 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
HOXC13P31276 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC13P31276 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
HOXC13P31276 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.64■□□□□ 0.09
HOXC13P31276 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HOXC13P31276 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.64■□□□□ 0.09
HOXC13P31276 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.64■□□□□ 0.09
HOXC13P31276 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.64■□□□□ 0.09
HOXC13P31276 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.64■□□□□ 0.09
HOXC13P31276 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.64■□□□□ 0.09
HOXC13P31276 MTX1P1-201ENST00000440904 838 ntBASIC15.64■□□□□ 0.09
HOXC13P31276 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC13P31276 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC13P31276 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC13P31276 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HOXC13P31276 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
HOXC13P31276 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms