Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.51■□□□□ 0.55
TM4SF1P30408 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.51■□□□□ 0.55
TM4SF1P30408 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 Z69890.1-201ENST00000382990 339 ntBASIC18.51■□□□□ 0.55
TM4SF1P30408 TSPY25P-201ENST00000429463 745 ntBASIC18.51■□□□□ 0.55
TM4SF1P30408 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC18.51■□□□□ 0.55
TM4SF1P30408 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC18.51■□□□□ 0.55
TM4SF1P30408 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC18.51■□□□□ 0.55
TM4SF1P30408 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC18.51■□□□□ 0.55
TM4SF1P30408 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 AC005618.3-201ENST00000624928 458 ntBASIC18.51■□□□□ 0.55
TM4SF1P30408 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.51■□□□□ 0.55
TM4SF1P30408 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TM4SF1P30408 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TM4SF1P30408 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
TM4SF1P30408 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TM4SF1P30408 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.51■□□□□ 0.55
TM4SF1P30408 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TM4SF1P30408 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TM4SF1P30408 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.5■□□□□ 0.55
TM4SF1P30408 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
TM4SF1P30408 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.5■□□□□ 0.55
TM4SF1P30408 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.5■□□□□ 0.55
TM4SF1P30408 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.5■□□□□ 0.55
TM4SF1P30408 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TM4SF1P30408 HIST2H2BA-201ENST00000412169 381 ntBASIC18.5■□□□□ 0.55
TM4SF1P30408 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.5■□□□□ 0.55
TM4SF1P30408 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.5■□□□□ 0.55
TM4SF1P30408 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC18.5■□□□□ 0.55
TM4SF1P30408 AC114947.1-202ENST00000514136 344 ntBASIC18.5■□□□□ 0.55
TM4SF1P30408 ALG1L6P-201ENST00000515248 758 ntBASIC18.5■□□□□ 0.55
TM4SF1P30408 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC18.5■□□□□ 0.55
TM4SF1P30408 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.5■□□□□ 0.55
TM4SF1P30408 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TM4SF1P30408 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.5■□□□□ 0.55
TM4SF1P30408 AC087392.5-201ENST00000612517 489 ntBASIC18.5■□□□□ 0.55
TM4SF1P30408 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.5■□□□□ 0.55
TM4SF1P30408 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TM4SF1P30408 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.5■□□□□ 0.55
TM4SF1P30408 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
TM4SF1P30408 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TM4SF1P30408 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.5■□□□□ 0.55
TM4SF1P30408 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TM4SF1P30408 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.49■□□□□ 0.55
TM4SF1P30408 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC18.49■□□□□ 0.55
TM4SF1P30408 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 RN7SL81P-201ENST00000493781 261 ntBASIC18.49■□□□□ 0.55
TM4SF1P30408 ORAOV1P1-201ENST00000503108 395 ntBASIC18.49■□□□□ 0.55
TM4SF1P30408 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18.49■□□□□ 0.55
TM4SF1P30408 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.49■□□□□ 0.55
TM4SF1P30408 AC107464.3-201ENST00000609172 737 ntBASIC18.49■□□□□ 0.55
TM4SF1P30408 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TM4SF1P30408 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.49■□□□□ 0.55
TM4SF1P30408 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TM4SF1P30408 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 AC013726.1-201ENST00000563747 2285 ntBASIC18.49■□□□□ 0.55
TM4SF1P30408 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.49■□□□□ 0.55
TM4SF1P30408 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 AP000845.1-201ENST00000581677 2131 ntBASIC18.49■□□□□ 0.55
TM4SF1P30408 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms