Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.2■□□□□ 0.02
HTR1BP28222 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HTR1BP28222 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 AC093525.8-201ENST00000624099 1342 ntBASIC15.19■□□□□ 0.02
HTR1BP28222 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.19■□□□□ 0.02
HTR1BP28222 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR1BP28222 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HTR1BP28222 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.19■□□□□ 0.02
HTR1BP28222 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR1BP28222 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR1BP28222 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.19■□□□□ 0.02
HTR1BP28222 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HTR1BP28222 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.19■□□□□ 0.02
HTR1BP28222 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR1BP28222 HLA-V-201ENST00000429037 534 ntBASIC15.19■□□□□ 0.02
HTR1BP28222 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.19■□□□□ 0.02
HTR1BP28222 BNIP3P42-201ENST00000454982 569 ntBASIC15.19■□□□□ 0.02
HTR1BP28222 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR1BP28222 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.19■□□□□ 0.02
HTR1BP28222 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
HTR1BP28222 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.19■□□□□ 0.02
HTR1BP28222 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 KRT90P-201ENST00000549264 1064 ntBASIC15.19■□□□□ 0.02
HTR1BP28222 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.19■□□□□ 0.02
HTR1BP28222 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HTR1BP28222 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.19■□□□□ 0.02
HTR1BP28222 BNIP3P29-201ENST00000598302 571 ntBASIC15.19■□□□□ 0.02
HTR1BP28222 AC011447.5-201ENST00000616168 564 ntBASIC15.19■□□□□ 0.02
HTR1BP28222 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HTR1BP28222 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
HTR1BP28222 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HTR1BP28222 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.19■□□□□ 0.02
HTR1BP28222 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.19■□□□□ 0.02
HTR1BP28222 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.19■□□□□ 0.02
HTR1BP28222 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HTR1BP28222 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HTR1BP28222 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.19■□□□□ 0.02
HTR1BP28222 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.19■□□□□ 0.02
HTR1BP28222 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HTR1BP28222 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HTR1BP28222 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
HTR1BP28222 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HTR1BP28222 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HTR1BP28222 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.18■□□□□ 0.02
HTR1BP28222 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.18■□□□□ 0.02
HTR1BP28222 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.18■□□□□ 0.02
HTR1BP28222 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.18■□□□□ 0.02
HTR1BP28222 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
HTR1BP28222 ACTBP8-201ENST00000403258 1108 ntBASIC15.18■□□□□ 0.02
HTR1BP28222 KLF2P2-201ENST00000416807 1039 ntBASIC15.18■□□□□ 0.02
HTR1BP28222 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.18■□□□□ 0.02
HTR1BP28222 YBX1P6-201ENST00000442962 1002 ntBASIC15.18■□□□□ 0.02
HTR1BP28222 CSF2RBP1-201ENST00000447905 391 ntBASIC15.18■□□□□ 0.02
HTR1BP28222 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.18■□□□□ 0.02
HTR1BP28222 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.18■□□□□ 0.02
HTR1BP28222 AC025279.2-201ENST00000569730 653 ntBASIC15.18■□□□□ 0.02
HTR1BP28222 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.18■□□□□ 0.02
HTR1BP28222 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.18■□□□□ 0.02
HTR1BP28222 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HTR1BP28222 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms