Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.16□□□□□ -0.14
UBL4AP11441 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
UBL4AP11441 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
UBL4AP11441 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UBL4AP11441 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UBL4AP11441 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
UBL4AP11441 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
UBL4AP11441 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
UBL4AP11441 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
UBL4AP11441 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
UBL4AP11441 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.16□□□□□ -0.14
UBL4AP11441 FAM86LP-201ENST00000478302 853 ntBASIC14.16□□□□□ -0.14
UBL4AP11441 AC093004.1-201ENST00000508850 424 ntBASIC14.16□□□□□ -0.14
UBL4AP11441 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.16□□□□□ -0.14
UBL4AP11441 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.16□□□□□ -0.14
UBL4AP11441 AC055876.2-201ENST00000531834 546 ntBASIC14.16□□□□□ -0.14
UBL4AP11441 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.16□□□□□ -0.14
UBL4AP11441 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
UBL4AP11441 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.16□□□□□ -0.14
UBL4AP11441 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.16□□□□□ -0.14
UBL4AP11441 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.16□□□□□ -0.14
UBL4AP11441 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.16□□□□□ -0.14
UBL4AP11441 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.16□□□□□ -0.14
UBL4AP11441 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
UBL4AP11441 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 DGCR9-201ENST00000609630 2415 ntBASIC14.16□□□□□ -0.14
UBL4AP11441 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
UBL4AP11441 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.16□□□□□ -0.14
UBL4AP11441 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.16□□□□□ -0.14
UBL4AP11441 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UBL4AP11441 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
UBL4AP11441 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBL4AP11441 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.16□□□□□ -0.14
UBL4AP11441 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
UBL4AP11441 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
UBL4AP11441 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
UBL4AP11441 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
UBL4AP11441 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.15□□□□□ -0.14
UBL4AP11441 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
UBL4AP11441 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.15□□□□□ -0.14
UBL4AP11441 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
UBL4AP11441 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.15□□□□□ -0.14
UBL4AP11441 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.15□□□□□ -0.14
UBL4AP11441 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.15□□□□□ -0.14
UBL4AP11441 GNAQP1-201ENST00000444815 1067 ntBASIC14.15□□□□□ -0.14
UBL4AP11441 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.15□□□□□ -0.14
UBL4AP11441 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.15□□□□□ -0.14
UBL4AP11441 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.15□□□□□ -0.14
UBL4AP11441 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 RRP7BP-205ENST00000566851 833 ntBASIC14.15□□□□□ -0.14
UBL4AP11441 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.15□□□□□ -0.14
UBL4AP11441 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
UBL4AP11441 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
UBL4AP11441 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.15□□□□□ -0.14
UBL4AP11441 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.15□□□□□ -0.14
UBL4AP11441 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBL4AP11441 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms