Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.76■□□□□ 0.11
CD48P09326 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CD48P09326 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CD48P09326 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
CD48P09326 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.75■□□□□ 0.11
CD48P09326 AC067930.6-201ENST00000623257 4947 ntBASIC15.75■□□□□ 0.11
CD48P09326 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CD48P09326 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.75■□□□□ 0.11
CD48P09326 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CD48P09326 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.75■□□□□ 0.11
CD48P09326 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CD48P09326 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.75■□□□□ 0.11
CD48P09326 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.75■□□□□ 0.11
CD48P09326 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.75■□□□□ 0.11
CD48P09326 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.75■□□□□ 0.11
CD48P09326 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.75■□□□□ 0.11
CD48P09326 TMEM261P1-201ENST00000604899 340 ntBASIC15.75■□□□□ 0.11
CD48P09326 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.75■□□□□ 0.11
CD48P09326 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CD48P09326 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD48P09326 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.75■□□□□ 0.11
CD48P09326 AL391825.1-201ENST00000457671 1364 ntBASIC15.75■□□□□ 0.11
CD48P09326 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CD48P09326 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
CD48P09326 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.74■□□□□ 0.11
CD48P09326 AP001267.2-201ENST00000532619 2086 ntBASIC15.74■□□□□ 0.11
CD48P09326 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.74■□□□□ 0.11
CD48P09326 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.74■□□□□ 0.11
CD48P09326 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CD48P09326 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 AL645937.2-201ENST00000396808 931 ntBASIC15.74■□□□□ 0.11
CD48P09326 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.74■□□□□ 0.11
CD48P09326 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.74■□□□□ 0.11
CD48P09326 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.74■□□□□ 0.11
CD48P09326 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.74■□□□□ 0.11
CD48P09326 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.74■□□□□ 0.11
CD48P09326 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CD48P09326 MIR4745-201ENST00000577608 62 ntBASIC15.74■□□□□ 0.11
CD48P09326 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.74■□□□□ 0.11
CD48P09326 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.74■□□□□ 0.11
CD48P09326 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.74■□□□□ 0.11
CD48P09326 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CD48P09326 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.74■□□□□ 0.11
CD48P09326 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.74■□□□□ 0.11
CD48P09326 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.74■□□□□ 0.11
CD48P09326 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.74■□□□□ 0.11
CD48P09326 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CD48P09326 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.74■□□□□ 0.11
CD48P09326 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.74■□□□□ 0.11
CD48P09326 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CD48P09326 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.74■□□□□ 0.11
CD48P09326 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.74■□□□□ 0.11
CD48P09326 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CD48P09326 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD48P09326 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.73■□□□□ 0.11
CD48P09326 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.73■□□□□ 0.11
CD48P09326 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD48P09326 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms