Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 BX284668.4-201ENST00000453917 508 ntBASIC17.8■□□□□ 0.44
HLA-DOAP06340 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 AC021723.1-201ENST00000486306 515 ntBASIC17.8■□□□□ 0.44
HLA-DOAP06340 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 AC005730.2-201ENST00000564549 1184 ntBASIC17.8■□□□□ 0.44
HLA-DOAP06340 AL451050.2-201ENST00000606967 682 ntBASIC17.8■□□□□ 0.44
HLA-DOAP06340 AL136301.1-201ENST00000615830 422 ntBASIC17.8■□□□□ 0.44
HLA-DOAP06340 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DOAP06340 AC136621.1-201ENST00000624017 2304 ntBASIC17.8■□□□□ 0.44
HLA-DOAP06340 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DOAP06340 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HLA-DOAP06340 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DOAP06340 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DOAP06340 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 AC011840.2-201ENST00000563063 1520 ntBASIC17.79■□□□□ 0.44
HLA-DOAP06340 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DOAP06340 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DOAP06340 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 FNTAP2-201ENST00000430308 634 ntBASIC17.79■□□□□ 0.44
HLA-DOAP06340 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DOAP06340 SERPINA13P-202ENST00000478994 924 ntBASIC17.79■□□□□ 0.44
HLA-DOAP06340 AP000845.1-201ENST00000581677 2131 ntBASIC17.79■□□□□ 0.44
HLA-DOAP06340 AL358472.3-201ENST00000608147 415 ntBASIC17.79■□□□□ 0.44
HLA-DOAP06340 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.79■□□□□ 0.44
HLA-DOAP06340 AL023803.2-201ENST00000620080 638 ntBASIC17.79■□□□□ 0.44
HLA-DOAP06340 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DOAP06340 HYMAI-201ENST00000635591 3347 ntBASIC17.79■□□□□ 0.44
HLA-DOAP06340 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DOAP06340 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DOAP06340 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DOAP06340 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DOAP06340 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DOAP06340 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DOAP06340 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DOAP06340 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DOAP06340 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DOAP06340 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DOAP06340 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DOAP06340 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DOAP06340 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DOAP06340 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DOAP06340 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HLA-DOAP06340 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DOAP06340 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DOAP06340 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DOAP06340 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DOAP06340 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DOAP06340 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DOAP06340 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms