Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
MT-CO1P00395 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-CO1P00395 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.63■□□□□ 0.09
MT-CO1P00395 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-CO1P00395 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
MT-CO1P00395 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-CO1P00395 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.63■□□□□ 0.09
MT-CO1P00395 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
MT-CO1P00395 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-CO1P00395 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.63■□□□□ 0.09
MT-CO1P00395 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.63■□□□□ 0.09
MT-CO1P00395 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MT-CO1P00395 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.62■□□□□ 0.09
MT-CO1P00395 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
MT-CO1P00395 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 PCDHA3-202ENST00000532566 4594 ntBASIC15.62■□□□□ 0.09
MT-CO1P00395 AC148477.4-201ENST00000613430 1793 ntBASIC15.62■□□□□ 0.09
MT-CO1P00395 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.62■□□□□ 0.09
MT-CO1P00395 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.62■□□□□ 0.09
MT-CO1P00395 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
MT-CO1P00395 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
MT-CO1P00395 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
MT-CO1P00395 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.62■□□□□ 0.09
MT-CO1P00395 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
MT-CO1P00395 AL355864.2-201ENST00000447420 863 ntBASIC15.62■□□□□ 0.09
MT-CO1P00395 AC004066.1-201ENST00000502488 802 ntBASIC15.62■□□□□ 0.09
MT-CO1P00395 AC119751.2-201ENST00000504529 210 ntBASIC15.62■□□□□ 0.09
MT-CO1P00395 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.62■□□□□ 0.09
MT-CO1P00395 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
MT-CO1P00395 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.62■□□□□ 0.09
MT-CO1P00395 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.62■□□□□ 0.09
MT-CO1P00395 AC017083.2-201ENST00000608069 979 ntBASIC15.62■□□□□ 0.09
MT-CO1P00395 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
MT-CO1P00395 AL645728.2-202ENST00000641679 227 ntBASIC15.62■□□□□ 0.09
MT-CO1P00395 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.62■□□□□ 0.09
MT-CO1P00395 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.62■□□□□ 0.09
MT-CO1P00395 AL109954.1-202ENST00000564051 2148 ntBASIC15.62■□□□□ 0.09
MT-CO1P00395 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MT-CO1P00395 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 PDIA3P1-201ENST00000471856 1510 ntBASIC15.62■□□□□ 0.09
MT-CO1P00395 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MT-CO1P00395 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
MT-CO1P00395 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 AC006486.2-201ENST00000624246 2199 ntBASIC15.62■□□□□ 0.09
MT-CO1P00395 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.62■□□□□ 0.09
MT-CO1P00395 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.62■□□□□ 0.09
MT-CO1P00395 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MT-CO1P00395 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-CO1P00395 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 AC091951.1-201ENST00000512854 2465 ntBASIC15.61■□□□□ 0.09
MT-CO1P00395 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
MT-CO1P00395 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-CO1P00395 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.61■□□□□ 0.09
MT-CO1P00395 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
MT-CO1P00395 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-CO1P00395 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 MIR658-201ENST00000385210 100 ntBASIC15.61■□□□□ 0.09
MT-CO1P00395 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
MT-CO1P00395 KLF2P2-201ENST00000416807 1039 ntBASIC15.61■□□□□ 0.09
MT-CO1P00395 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MT-CO1P00395 KRT43P-201ENST00000434019 910 ntBASIC15.61■□□□□ 0.09
MT-CO1P00395 AC234783.1-201ENST00000441761 496 ntBASIC15.61■□□□□ 0.09
MT-CO1P00395 AC244107.1-201ENST00000442033 332 ntBASIC15.61■□□□□ 0.09
MT-CO1P00395 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.61■□□□□ 0.09
MT-CO1P00395 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.61■□□□□ 0.09
MT-CO1P00395 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.61■□□□□ 0.09
MT-CO1P00395 FTH1P14-201ENST00000482930 551 ntBASIC15.61■□□□□ 0.09
MT-CO1P00395 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms