Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
CNOT4O95628 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CNOT4O95628 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.59□□□□□ -0.23
CNOT4O95628 AC104457.1-201ENST00000401024 814 ntBASIC13.59□□□□□ -0.23
CNOT4O95628 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.59□□□□□ -0.23
CNOT4O95628 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CNOT4O95628 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CNOT4O95628 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.59□□□□□ -0.23
CNOT4O95628 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 FAM8A2P-201ENST00000528813 1142 ntBASIC13.59□□□□□ -0.23
CNOT4O95628 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CNOT4O95628 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.59□□□□□ -0.23
CNOT4O95628 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.59□□□□□ -0.23
CNOT4O95628 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.59□□□□□ -0.23
CNOT4O95628 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.59□□□□□ -0.23
CNOT4O95628 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.59□□□□□ -0.23
CNOT4O95628 CLUHP6-201ENST00000580789 941 ntBASIC13.59□□□□□ -0.23
CNOT4O95628 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 BTNL10-201ENST00000595971 695 ntBASIC13.59□□□□□ -0.23
CNOT4O95628 AC233724.13-201ENST00000598383 410 ntBASIC13.59□□□□□ -0.23
CNOT4O95628 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CNOT4O95628 MIR6775-201ENST00000617557 69 ntBASIC13.59□□□□□ -0.23
CNOT4O95628 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
CNOT4O95628 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.59□□□□□ -0.23
CNOT4O95628 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CNOT4O95628 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.59□□□□□ -0.23
CNOT4O95628 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.59□□□□□ -0.23
CNOT4O95628 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 AC092127.1-201ENST00000567093 3455 ntBASIC13.59□□□□□ -0.23
CNOT4O95628 AC020658.6-201ENST00000623564 1870 ntBASIC13.59□□□□□ -0.23
CNOT4O95628 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CNOT4O95628 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CNOT4O95628 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.58□□□□□ -0.23
CNOT4O95628 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.58□□□□□ -0.23
CNOT4O95628 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CNOT4O95628 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CNOT4O95628 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
CNOT4O95628 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CNOT4O95628 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
CNOT4O95628 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.58□□□□□ -0.23
CNOT4O95628 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.58□□□□□ -0.24
CNOT4O95628 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.58□□□□□ -0.24
CNOT4O95628 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.58□□□□□ -0.24
CNOT4O95628 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 FAM86MP-201ENST00000340703 885 ntBASIC13.58□□□□□ -0.24
CNOT4O95628 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.58□□□□□ -0.24
CNOT4O95628 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 BAATP1-201ENST00000412284 1225 ntBASIC13.58□□□□□ -0.24
CNOT4O95628 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.58□□□□□ -0.24
CNOT4O95628 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.58□□□□□ -0.24
CNOT4O95628 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.58□□□□□ -0.24
CNOT4O95628 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.58□□□□□ -0.24
CNOT4O95628 AC012441.1-201ENST00000446669 685 ntBASIC13.58□□□□□ -0.24
CNOT4O95628 AC114812.1-204ENST00000449669 728 ntBASIC13.58□□□□□ -0.24
CNOT4O95628 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.58□□□□□ -0.24
CNOT4O95628 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.58□□□□□ -0.24
CNOT4O95628 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.58□□□□□ -0.24
CNOT4O95628 AC119751.2-201ENST00000504529 210 ntBASIC13.58□□□□□ -0.24
CNOT4O95628 KRT18P25-201ENST00000508931 1278 ntBASIC13.58□□□□□ -0.24
CNOT4O95628 AC068587.3-201ENST00000526613 355 ntBASIC13.58□□□□□ -0.24
CNOT4O95628 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.58□□□□□ -0.24
CNOT4O95628 TDH-203ENST00000531764 1110 ntBASIC13.58□□□□□ -0.24
CNOT4O95628 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CNOT4O95628 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.58□□□□□ -0.24
CNOT4O95628 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.58□□□□□ -0.24
CNOT4O95628 AL022328.1-201ENST00000610050 478 ntBASIC13.58□□□□□ -0.24
CNOT4O95628 AC005252.2-201ENST00000624630 1141 ntBASIC13.58□□□□□ -0.24
CNOT4O95628 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.58□□□□□ -0.24
CNOT4O95628 AL603764.1-201ENST00000636452 321 ntBASIC13.58□□□□□ -0.24
CNOT4O95628 PRSS30P-206ENST00000641773 873 ntBASIC13.58□□□□□ -0.24
CNOT4O95628 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.58□□□□□ -0.24
CNOT4O95628 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms