Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.33■□□□□ 0.04
VAPBO95292 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
VAPBO95292 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VAPBO95292 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.33■□□□□ 0.04
VAPBO95292 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
VAPBO95292 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
VAPBO95292 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VAPBO95292 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.33■□□□□ 0.04
VAPBO95292 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VAPBO95292 GNAQP1-201ENST00000444815 1067 ntBASIC15.33■□□□□ 0.04
VAPBO95292 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
VAPBO95292 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.33■□□□□ 0.04
VAPBO95292 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.33■□□□□ 0.04
VAPBO95292 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.33■□□□□ 0.04
VAPBO95292 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.33■□□□□ 0.04
VAPBO95292 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.33■□□□□ 0.04
VAPBO95292 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VAPBO95292 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.33■□□□□ 0.04
VAPBO95292 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VAPBO95292 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
VAPBO95292 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
VAPBO95292 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
VAPBO95292 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
VAPBO95292 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VAPBO95292 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VAPBO95292 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.33■□□□□ 0.04
VAPBO95292 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
VAPBO95292 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VAPBO95292 LILRP1-201ENST00000444199 1370 ntBASIC15.33■□□□□ 0.04
VAPBO95292 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
VAPBO95292 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.33■□□□□ 0.04
VAPBO95292 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VAPBO95292 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VAPBO95292 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
VAPBO95292 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VAPBO95292 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VAPBO95292 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.33■□□□□ 0.04
VAPBO95292 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VAPBO95292 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VAPBO95292 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
VAPBO95292 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VAPBO95292 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VAPBO95292 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VAPBO95292 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
VAPBO95292 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VAPBO95292 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VAPBO95292 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VAPBO95292 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VAPBO95292 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VAPBO95292 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VAPBO95292 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
VAPBO95292 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VAPBO95292 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
VAPBO95292 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
VAPBO95292 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.32■□□□□ 0.04
VAPBO95292 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.32■□□□□ 0.04
VAPBO95292 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.32■□□□□ 0.04
VAPBO95292 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.32■□□□□ 0.04
VAPBO95292 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.32■□□□□ 0.04
VAPBO95292 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.32■□□□□ 0.04
VAPBO95292 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.32■□□□□ 0.04
VAPBO95292 CYMP-203ENST00000474680 1263 ntBASIC15.32■□□□□ 0.04
VAPBO95292 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.32■□□□□ 0.04
VAPBO95292 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.32■□□□□ 0.04
VAPBO95292 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
VAPBO95292 AL049840.4-201ENST00000602422 811 ntBASIC15.32■□□□□ 0.04
VAPBO95292 AC107373.2-201ENST00000607735 490 ntBASIC15.32■□□□□ 0.04
VAPBO95292 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.32■□□□□ 0.04
VAPBO95292 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.32■□□□□ 0.04
VAPBO95292 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.32■□□□□ 0.04
VAPBO95292 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.32■□□□□ 0.04
VAPBO95292 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VAPBO95292 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.32■□□□□ 0.04
VAPBO95292 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.32■□□□□ 0.04
VAPBO95292 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VAPBO95292 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VAPBO95292 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VAPBO95292 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VAPBO95292 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.32■□□□□ 0.04
VAPBO95292 MTHFR-210ENST00000641407 2387 ntBASIC15.32■□□□□ 0.04
VAPBO95292 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VAPBO95292 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VAPBO95292 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.32■□□□□ 0.04
VAPBO95292 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VAPBO95292 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VAPBO95292 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VAPBO95292 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VAPBO95292 AC015656.1-201ENST00000624209 3578 ntBASIC15.31■□□□□ 0.04
VAPBO95292 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VAPBO95292 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.31■□□□□ 0.04
VAPBO95292 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPBO95292 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPBO95292 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPBO95292 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPBO95292 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPBO95292 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPBO95292 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VAPBO95292 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VAPBO95292 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
VAPBO95292 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms