Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 SPTLC1P3-201ENST00000403408 259 ntBASIC6.58□□□□□ -1.36
USH2AO75445 AL773545.2-201ENST00000442149 472 ntBASIC6.58□□□□□ -1.36
USH2AO75445 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC6.58□□□□□ -1.36
USH2AO75445 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC6.58□□□□□ -1.36
USH2AO75445 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC6.58□□□□□ -1.36
USH2AO75445 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC6.58□□□□□ -1.36
USH2AO75445 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 LTB4R2-202ENST00000528054 3092 ntBASIC6.58□□□□□ -1.36
USH2AO75445 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
USH2AO75445 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
USH2AO75445 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC6.58□□□□□ -1.36
USH2AO75445 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 AC025186.1-201ENST00000478174 870 ntBASIC6.58□□□□□ -1.36
USH2AO75445 RN7SL530P-201ENST00000485097 298 ntBASIC6.58□□□□□ -1.36
USH2AO75445 MIR2278-201ENST00000516344 96 ntBASIC6.58□□□□□ -1.36
USH2AO75445 AC078814.4-201ENST00000546650 327 ntBASIC6.58□□□□□ -1.36
USH2AO75445 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC6.58□□□□□ -1.36
USH2AO75445 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC6.58□□□□□ -1.36
USH2AO75445 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC6.58□□□□□ -1.36
USH2AO75445 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC6.58□□□□□ -1.36
USH2AO75445 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC6.58□□□□□ -1.36
USH2AO75445 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USH2AO75445 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC6.58□□□□□ -1.36
USH2AO75445 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC6.58□□□□□ -1.36
USH2AO75445 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
USH2AO75445 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
USH2AO75445 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 PYY2-201ENST00000315776 282 ntBASIC6.57□□□□□ -1.36
USH2AO75445 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC6.57□□□□□ -1.36
USH2AO75445 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC6.57□□□□□ -1.36
USH2AO75445 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 PFN2-205ENST00000461868 613 ntTSL 2 BASIC6.57□□□□□ -1.36
USH2AO75445 RHEB-207ENST00000496004 744 ntTSL 2 BASIC6.57□□□□□ -1.36
USH2AO75445 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC6.57□□□□□ -1.36
USH2AO75445 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC6.57□□□□□ -1.36
USH2AO75445 OR5BD1P-201ENST00000532527 817 ntBASIC6.57□□□□□ -1.36
USH2AO75445 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC6.57□□□□□ -1.36
USH2AO75445 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC6.57□□□□□ -1.36
USH2AO75445 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
USH2AO75445 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
USH2AO75445 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC6.57□□□□□ -1.36
USH2AO75445 AC131235.2-201ENST00000445553 1057 ntBASIC6.57□□□□□ -1.36
USH2AO75445 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC6.57□□□□□ -1.36
USH2AO75445 ALG3P1-201ENST00000508806 1114 ntBASIC6.57□□□□□ -1.36
USH2AO75445 AP000920.1-201ENST00000531824 344 ntBASIC6.57□□□□□ -1.36
USH2AO75445 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
USH2AO75445 DLK1-205ENST00000556051 469 ntTSL 2 BASIC6.57□□□□□ -1.36
USH2AO75445 TRMT112P3-201ENST00000580149 358 ntBASIC6.57□□□□□ -1.36
USH2AO75445 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC6.57□□□□□ -1.36
USH2AO75445 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC6.57□□□□□ -1.36
USH2AO75445 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
USH2AO75445 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
USH2AO75445 FKBP4P8-201ENST00000610931 1369 ntBASIC6.57□□□□□ -1.36
USH2AO75445 ME2P1-201ENST00000426028 1970 ntBASIC6.57□□□□□ -1.36
USH2AO75445 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC6.57□□□□□ -1.36
USH2AO75445 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC6.57□□□□□ -1.36
USH2AO75445 AC084364.1-201ENST00000551967 1556 ntBASIC6.57□□□□□ -1.36
USH2AO75445 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC6.57□□□□□ -1.36
USH2AO75445 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC6.57□□□□□ -1.36
USH2AO75445 AC007881.1-201ENST00000437460 187 ntBASIC6.57□□□□□ -1.36
USH2AO75445 RN7SL147P-201ENST00000487345 298 ntBASIC6.57□□□□□ -1.36
USH2AO75445 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms