Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC022137.2-201ENST00000503482 481 ntBASIC15.19■□□□□ 0.02
LDB2O43679 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.19■□□□□ 0.02
LDB2O43679 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.19■□□□□ 0.02
LDB2O43679 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.19■□□□□ 0.02
LDB2O43679 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.19■□□□□ 0.02
LDB2O43679 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.19■□□□□ 0.02
LDB2O43679 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.19■□□□□ 0.02
LDB2O43679 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.19■□□□□ 0.02
LDB2O43679 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LDB2O43679 MTHFR-210ENST00000641407 2387 ntBASIC15.19■□□□□ 0.02
LDB2O43679 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.18■□□□□ 0.02
LDB2O43679 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.18■□□□□ 0.02
LDB2O43679 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.18■□□□□ 0.02
LDB2O43679 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.18■□□□□ 0.02
LDB2O43679 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LDB2O43679 MSTO2P-201ENST00000314835 1709 ntBASIC15.18■□□□□ 0.02
LDB2O43679 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.18■□□□□ 0.02
LDB2O43679 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.18■□□□□ 0.02
LDB2O43679 ACTBP8-201ENST00000403258 1108 ntBASIC15.18■□□□□ 0.02
LDB2O43679 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.18■□□□□ 0.02
LDB2O43679 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.18■□□□□ 0.02
LDB2O43679 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.18■□□□□ 0.02
LDB2O43679 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.18■□□□□ 0.02
LDB2O43679 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LDB2O43679 AC022616.1-201ENST00000518688 554 ntBASIC15.18■□□□□ 0.02
LDB2O43679 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LDB2O43679 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.18■□□□□ 0.02
LDB2O43679 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.18■□□□□ 0.02
LDB2O43679 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.18■□□□□ 0.02
LDB2O43679 AL358472.5-202ENST00000641448 1267 ntBASIC15.18■□□□□ 0.02
LDB2O43679 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.18■□□□□ 0.02
LDB2O43679 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LDB2O43679 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.18■□□□□ 0.02
LDB2O43679 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
LDB2O43679 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LDB2O43679 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.18■□□□□ 0.02
LDB2O43679 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LDB2O43679 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.18■□□□□ 0.02
LDB2O43679 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LDB2O43679 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LDB2O43679 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.17■□□□□ 0.02
LDB2O43679 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LDB2O43679 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LDB2O43679 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LDB2O43679 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.17■□□□□ 0.02
LDB2O43679 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.17■□□□□ 0.02
LDB2O43679 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LDB2O43679 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.17■□□□□ 0.02
LDB2O43679 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LDB2O43679 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LDB2O43679 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LDB2O43679 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LDB2O43679 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LDB2O43679 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.17■□□□□ 0.02
LDB2O43679 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.17■□□□□ 0.02
LDB2O43679 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LDB2O43679 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LDB2O43679 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.17■□□□□ 0.02
LDB2O43679 AC232323.1-201ENST00000540724 2099 ntBASIC15.17■□□□□ 0.02
LDB2O43679 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LDB2O43679 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LDB2O43679 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.17■□□□□ 0.02
LDB2O43679 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LDB2O43679 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LDB2O43679 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.17■□□□□ 0.02
LDB2O43679 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LDB2O43679 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.17■□□□□ 0.02
LDB2O43679 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LDB2O43679 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms