Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
MSI1O43347 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MSI1O43347 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MSI1O43347 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
MSI1O43347 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.78■□□□□ 0.12
MSI1O43347 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MSI1O43347 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.78■□□□□ 0.12
MSI1O43347 AC099336.1-201ENST00000417053 1171 ntBASIC15.78■□□□□ 0.12
MSI1O43347 AC026954.1-201ENST00000429771 1293 ntBASIC15.78■□□□□ 0.12
MSI1O43347 BNIP3P42-201ENST00000454982 569 ntBASIC15.78■□□□□ 0.12
MSI1O43347 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.78■□□□□ 0.12
MSI1O43347 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.78■□□□□ 0.12
MSI1O43347 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.78■□□□□ 0.12
MSI1O43347 AC104640.1-201ENST00000562617 2109 ntBASIC15.78■□□□□ 0.12
MSI1O43347 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MSI1O43347 BNIP3P29-201ENST00000598302 571 ntBASIC15.78■□□□□ 0.12
MSI1O43347 AC011447.5-201ENST00000616168 564 ntBASIC15.78■□□□□ 0.12
MSI1O43347 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MSI1O43347 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
MSI1O43347 AC023157.3-201ENST00000619086 2088 ntBASIC15.78■□□□□ 0.12
MSI1O43347 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.78■□□□□ 0.12
MSI1O43347 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
MSI1O43347 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MSI1O43347 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MSI1O43347 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.78■□□□□ 0.12
MSI1O43347 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.78■□□□□ 0.12
MSI1O43347 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MSI1O43347 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MSI1O43347 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MSI1O43347 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.77■□□□□ 0.12
MSI1O43347 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
MSI1O43347 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MSI1O43347 WASH3P-207ENST00000560956 1394 ntBASIC15.77■□□□□ 0.12
MSI1O43347 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.77■□□□□ 0.12
MSI1O43347 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.77■□□□□ 0.12
MSI1O43347 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.77■□□□□ 0.12
MSI1O43347 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MSI1O43347 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MSI1O43347 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MSI1O43347 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.77■□□□□ 0.12
MSI1O43347 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MSI1O43347 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.77■□□□□ 0.12
MSI1O43347 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MSI1O43347 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.77■□□□□ 0.12
MSI1O43347 CNN2P8-201ENST00000421872 913 ntBASIC15.77■□□□□ 0.12
MSI1O43347 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
MSI1O43347 AC244107.1-201ENST00000442033 332 ntBASIC15.77■□□□□ 0.12
MSI1O43347 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.77■□□□□ 0.12
MSI1O43347 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MSI1O43347 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.77■□□□□ 0.12
MSI1O43347 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.77■□□□□ 0.12
MSI1O43347 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.77■□□□□ 0.12
MSI1O43347 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
MSI1O43347 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MSI1O43347 AP005482.1-201ENST00000563722 1273 ntBASIC15.77■□□□□ 0.12
MSI1O43347 DUX4L47-201ENST00000566374 394 ntBASIC15.77■□□□□ 0.12
MSI1O43347 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.77■□□□□ 0.12
MSI1O43347 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.77■□□□□ 0.12
MSI1O43347 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.77■□□□□ 0.12
MSI1O43347 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.77■□□□□ 0.12
MSI1O43347 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
MSI1O43347 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
MSI1O43347 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MSI1O43347 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MSI1O43347 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MSI1O43347 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
MSI1O43347 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MSI1O43347 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MSI1O43347 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
MSI1O43347 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.77■□□□□ 0.11
MSI1O43347 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MSI1O43347 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
MSI1O43347 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MSI1O43347 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MSI1O43347 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.77■□□□□ 0.11
MSI1O43347 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MSI1O43347 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
MSI1O43347 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
MSI1O43347 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.77■□□□□ 0.11
MSI1O43347 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MSI1O43347 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
MSI1O43347 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MSI1O43347 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MSI1O43347 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.76■□□□□ 0.11
MSI1O43347 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MSI1O43347 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MSI1O43347 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MSI1O43347 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.76■□□□□ 0.11
MSI1O43347 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.76■□□□□ 0.11
MSI1O43347 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MSI1O43347 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MSI1O43347 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MSI1O43347 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.76■□□□□ 0.11
MSI1O43347 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
MSI1O43347 HLA-V-201ENST00000429037 534 ntBASIC15.76■□□□□ 0.11
MSI1O43347 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.76■□□□□ 0.11
MSI1O43347 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.76■□□□□ 0.11
MSI1O43347 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.76■□□□□ 0.11
MSI1O43347 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MSI1O43347 ENPP7P14-201ENST00000621765 1040 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms