Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 LINC02445-201ENST00000551387 459 ntTSL 5 BASIC21.55■■□□□ 1.04
MSH5O43196 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC21.55■■□□□ 1.04
MSH5O43196 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC21.55■■□□□ 1.04
MSH5O43196 AC010336.2-201ENST00000564226 506 ntBASIC21.55■■□□□ 1.04
MSH5O43196 AC017083.2-201ENST00000608069 979 ntBASIC21.55■■□□□ 1.04
MSH5O43196 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.55■■□□□ 1.04
MSH5O43196 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 AL512283.1-201ENST00000606756 1384 ntBASIC21.55■■□□□ 1.04
MSH5O43196 XKRY2-202ENST00000623874 1581 ntBASIC21.55■■□□□ 1.04
MSH5O43196 XKRY-202ENST00000624960 1581 ntBASIC21.55■■□□□ 1.04
MSH5O43196 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.55■■□□□ 1.04
MSH5O43196 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC21.55■■□□□ 1.04
MSH5O43196 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC21.55■■□□□ 1.04
MSH5O43196 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 BLK-205ENST00000529894 2017 ntTSL 5 BASIC21.55■■□□□ 1.04
MSH5O43196 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.55■■□□□ 1.04
MSH5O43196 CCL28-203ENST00000513525 1518 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSH5O43196 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
MSH5O43196 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC21.54■■□□□ 1.04
MSH5O43196 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSH5O43196 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC21.54■■□□□ 1.04
MSH5O43196 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC21.54■■□□□ 1.04
MSH5O43196 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MSH5O43196 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
MSH5O43196 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC21.54■■□□□ 1.04
MSH5O43196 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
MSH5O43196 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSH5O43196 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSH5O43196 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
MSH5O43196 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSH5O43196 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
MSH5O43196 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
MSH5O43196 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.54■■□□□ 1.04
MSH5O43196 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
MSH5O43196 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC21.54■■□□□ 1.04
MSH5O43196 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC21.54■■□□□ 1.04
MSH5O43196 MTND4P15-201ENST00000437913 1033 ntBASIC21.54■■□□□ 1.04
MSH5O43196 AL356259.1-201ENST00000443554 1059 ntTSL 5 BASIC21.54■■□□□ 1.04
MSH5O43196 SETD6P1-201ENST00000444575 317 ntBASIC21.54■■□□□ 1.04
MSH5O43196 ENTPD1-AS1-206ENST00000449197 523 ntTSL 2 BASIC21.54■■□□□ 1.04
MSH5O43196 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC21.54■■□□□ 1.04
MSH5O43196 MTND2P28-201ENST00000457540 1044 ntBASIC21.54■■□□□ 1.04
MSH5O43196 RAP1BP2-201ENST00000478270 544 ntBASIC21.54■■□□□ 1.04
MSH5O43196 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MSH5O43196 LTV1P1-201ENST00000510683 1237 ntBASIC21.54■■□□□ 1.04
MSH5O43196 AC093755.1-201ENST00000512950 1023 ntBASIC21.54■■□□□ 1.04
MSH5O43196 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC21.54■■□□□ 1.04
MSH5O43196 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.54■■□□□ 1.04
MSH5O43196 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MSH5O43196 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC21.54■■□□□ 1.04
MSH5O43196 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
MSH5O43196 LINC01579-206ENST00000556928 657 ntTSL 3 BASIC21.54■■□□□ 1.04
MSH5O43196 TP53TG3HP-202ENST00000569755 579 ntBASIC21.54■■□□□ 1.04
MSH5O43196 AC139099.1-203ENST00000570366 607 ntTSL 3 BASIC21.54■■□□□ 1.04
MSH5O43196 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC21.54■■□□□ 1.04
MSH5O43196 SPDYE12P-201ENST00000618416 771 ntBASIC21.54■■□□□ 1.04
MSH5O43196 AL049777.1-201ENST00000622740 518 ntBASIC21.54■■□□□ 1.04
MSH5O43196 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
MSH5O43196 HCCAT5-202ENST00000642127 1029 ntBASIC21.54■■□□□ 1.04
MSH5O43196 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC21.54■■□□□ 1.04
MSH5O43196 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSH5O43196 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSH5O43196 AC005224.1-201ENST00000458492 1537 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MSH5O43196 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC21.54■■□□□ 1.04
MSH5O43196 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC21.53■■□□□ 1.04
MSH5O43196 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSH5O43196 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSH5O43196 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
MSH5O43196 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MSH5O43196 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC21.53■■□□□ 1.04
MSH5O43196 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
MSH5O43196 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSH5O43196 RNU6-192P-201ENST00000391253 100 ntBASIC21.53■■□□□ 1.04
MSH5O43196 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
MSH5O43196 AC117434.1-201ENST00000419971 836 ntBASIC21.53■■□□□ 1.04
MSH5O43196 AL355493.1-201ENST00000422707 808 ntBASIC21.53■■□□□ 1.04
MSH5O43196 PPP1R2P1-210ENST00000429032 618 ntBASIC21.53■■□□□ 1.04
MSH5O43196 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSH5O43196 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC21.53■■□□□ 1.04
MSH5O43196 AC125618.1-201ENST00000472596 563 ntTSL 4 BASIC21.53■■□□□ 1.04
MSH5O43196 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC21.53■■□□□ 1.04
MSH5O43196 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC21.53■■□□□ 1.04
MSH5O43196 C14orf159-210ENST00000518665 959 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MSH5O43196 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
MSH5O43196 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.53■■□□□ 1.04
MSH5O43196 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
MSH5O43196 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.53■■□□□ 1.04
MSH5O43196 AL353600.1-201ENST00000608148 251 ntBASIC21.53■■□□□ 1.04
MSH5O43196 AC079395.2-201ENST00000610982 737 ntBASIC21.53■■□□□ 1.04
MSH5O43196 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSH5O43196 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC21.53■■□□□ 1.04
MSH5O43196 AP005212.4-201ENST00000614206 710 ntBASIC21.53■■□□□ 1.04
MSH5O43196 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSH5O43196 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms