Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ATP2A1O14983 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP2A1O14983 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP2A1O14983 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP2A1O14983 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ATP2A1O14983 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 SLC25A24P2-201ENST00000415059 510 ntBASIC17.32■□□□□ 0.36
ATP2A1O14983 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP2A1O14983 AC016700.1-201ENST00000429424 312 ntBASIC17.32■□□□□ 0.36
ATP2A1O14983 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP2A1O14983 HIST2H2BC-201ENST00000498492 580 ntBASIC17.32■□□□□ 0.36
ATP2A1O14983 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.32■□□□□ 0.36
ATP2A1O14983 AC005730.2-201ENST00000564549 1184 ntBASIC17.32■□□□□ 0.36
ATP2A1O14983 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.32■□□□□ 0.36
ATP2A1O14983 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 AC106872.11-201ENST00000605838 421 ntBASIC17.32■□□□□ 0.36
ATP2A1O14983 AC138696.2-201ENST00000607376 223 ntBASIC17.32■□□□□ 0.36
ATP2A1O14983 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
ATP2A1O14983 AL023803.2-201ENST00000620080 638 ntBASIC17.32■□□□□ 0.36
ATP2A1O14983 AC022748.3-201ENST00000621828 275 ntBASIC17.32■□□□□ 0.36
ATP2A1O14983 MIR600HG-201ENST00000449175 5984 ntBASIC17.32■□□□□ 0.36
ATP2A1O14983 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP2A1O14983 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP2A1O14983 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ATP2A1O14983 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP2A1O14983 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.32■□□□□ 0.36
ATP2A1O14983 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ATP2A1O14983 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATP2A1O14983 AL137783.1-201ENST00000623494 1896 ntBASIC17.31■□□□□ 0.36
ATP2A1O14983 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP2A1O14983 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ATP2A1O14983 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATP2A1O14983 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP2A1O14983 NKAIN1P1-201ENST00000435754 582 ntBASIC17.31■□□□□ 0.36
ATP2A1O14983 AC005077.2-201ENST00000449786 690 ntBASIC17.31■□□□□ 0.36
ATP2A1O14983 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.31■□□□□ 0.36
ATP2A1O14983 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP2A1O14983 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP2A1O14983 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP2A1O14983 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP2A1O14983 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 MIR3619-201ENST00000579667 83 ntBASIC17.31■□□□□ 0.36
ATP2A1O14983 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP2A1O14983 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.31■□□□□ 0.36
ATP2A1O14983 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP2A1O14983 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP2A1O14983 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ATP2A1O14983 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP2A1O14983 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP2A1O14983 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP2A1O14983 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.31■□□□□ 0.36
ATP2A1O14983 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP2A1O14983 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP2A1O14983 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP2A1O14983 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.31■□□□□ 0.36
ATP2A1O14983 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
ATP2A1O14983 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP2A1O14983 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP2A1O14983 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP2A1O14983 KRT8P29-201ENST00000420409 1371 ntBASIC17.3■□□□□ 0.36
ATP2A1O14983 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP2A1O14983 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms