Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC7O00311 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC7O00311 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC7O00311 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC7O00311 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDC7O00311 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC7O00311 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC7O00311 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.95□□□□□ -0.02
CDC7O00311 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC7O00311 MEP1AP4-201ENST00000423244 1087 ntBASIC14.95□□□□□ -0.02
CDC7O00311 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.95□□□□□ -0.02
CDC7O00311 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.95□□□□□ -0.02
CDC7O00311 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC7O00311 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.95□□□□□ -0.02
CDC7O00311 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 AC027796.2-201ENST00000575326 344 ntBASIC14.95□□□□□ -0.02
CDC7O00311 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC7O00311 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC7O00311 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDC7O00311 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
CDC7O00311 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDC7O00311 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC7O00311 AL137783.1-201ENST00000623494 1896 ntBASIC14.95□□□□□ -0.02
CDC7O00311 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDC7O00311 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDC7O00311 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
CDC7O00311 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.94□□□□□ -0.02
CDC7O00311 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CDC7O00311 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CDC7O00311 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.94□□□□□ -0.02
CDC7O00311 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.94□□□□□ -0.02
CDC7O00311 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDC7O00311 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.94□□□□□ -0.02
CDC7O00311 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 SPTLC1P1-201ENST00000447199 261 ntBASIC14.94□□□□□ -0.02
CDC7O00311 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.94□□□□□ -0.02
CDC7O00311 AC093004.1-201ENST00000508850 424 ntBASIC14.94□□□□□ -0.02
CDC7O00311 SERBP1P5-201ENST00000510079 1181 ntBASIC14.94□□□□□ -0.02
CDC7O00311 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.94□□□□□ -0.02
CDC7O00311 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.94□□□□□ -0.02
CDC7O00311 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.94□□□□□ -0.02
CDC7O00311 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.94□□□□□ -0.02
CDC7O00311 RRP7BP-205ENST00000566851 833 ntBASIC14.94□□□□□ -0.02
CDC7O00311 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.94□□□□□ -0.02
CDC7O00311 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.94□□□□□ -0.02
CDC7O00311 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDC7O00311 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.94□□□□□ -0.02
CDC7O00311 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.94□□□□□ -0.02
CDC7O00311 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CDC7O00311 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.94□□□□□ -0.02
CDC7O00311 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.94□□□□□ -0.02
CDC7O00311 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDC7O00311 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.94□□□□□ -0.02
CDC7O00311 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.94□□□□□ -0.02
CDC7O00311 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.93□□□□□ -0.02
CDC7O00311 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDC7O00311 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.93□□□□□ -0.02
CDC7O00311 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDC7O00311 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDC7O00311 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms