Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CFAP99D6REC4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CFAP99D6REC4 C1QBPP1-201ENST00000400117 770 ntBASIC15.27■□□□□ 0.04
CFAP99D6REC4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.04
CFAP99D6REC4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.27■□□□□ 0.04
CFAP99D6REC4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.27■□□□□ 0.04
CFAP99D6REC4 AL109954.1-202ENST00000564051 2148 ntBASIC15.27■□□□□ 0.04
CFAP99D6REC4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.27■□□□□ 0.04
CFAP99D6REC4 AC120045.2-201ENST00000567334 178 ntBASIC15.27■□□□□ 0.04
CFAP99D6REC4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.27■□□□□ 0.04
CFAP99D6REC4 MIR8072-201ENST00000614241 80 ntBASIC15.27■□□□□ 0.04
CFAP99D6REC4 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
CFAP99D6REC4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CFAP99D6REC4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.27■□□□□ 0.03
CFAP99D6REC4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CFAP99D6REC4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CFAP99D6REC4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CFAP99D6REC4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CFAP99D6REC4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.27■□□□□ 0.03
CFAP99D6REC4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CFAP99D6REC4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.27■□□□□ 0.03
CFAP99D6REC4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.27■□□□□ 0.03
CFAP99D6REC4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 GAPDHP40-201ENST00000505218 1006 ntBASIC15.26■□□□□ 0.03
CFAP99D6REC4 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 SPDYE22P-201ENST00000582158 798 ntBASIC15.26■□□□□ 0.03
CFAP99D6REC4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 CICP11-201ENST00000434745 2827 ntBASIC15.26■□□□□ 0.03
CFAP99D6REC4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.26■□□□□ 0.03
CFAP99D6REC4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.26■□□□□ 0.03
CFAP99D6REC4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 GRK6P1-201ENST00000400595 1711 ntBASIC15.26■□□□□ 0.03
CFAP99D6REC4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CFAP99D6REC4 AC023024.2-201ENST00000623561 1993 ntBASIC15.25■□□□□ 0.03
CFAP99D6REC4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CFAP99D6REC4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.25■□□□□ 0.03
CFAP99D6REC4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CFAP99D6REC4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.25■□□□□ 0.03
CFAP99D6REC4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.25■□□□□ 0.03
CFAP99D6REC4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CFAP99D6REC4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CFAP99D6REC4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
CFAP99D6REC4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CFAP99D6REC4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CFAP99D6REC4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.25■□□□□ 0.03
CFAP99D6REC4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms