Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 SPDYE19P-201ENST00000338590 713 ntBASIC12.28□□□□□ -0.44
SRRM4A7MD48 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 GNAQP1-201ENST00000444815 1067 ntBASIC12.28□□□□□ -0.44
SRRM4A7MD48 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.28□□□□□ -0.44
SRRM4A7MD48 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 AC026410.3-201ENST00000514280 936 ntBASIC12.28□□□□□ -0.44
SRRM4A7MD48 RFPL4AP1-201ENST00000530883 850 ntBASIC12.28□□□□□ -0.44
SRRM4A7MD48 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 TPRX2P-201ENST00000535362 881 ntBASIC12.28□□□□□ -0.44
SRRM4A7MD48 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 AC036164.1-201ENST00000570544 333 ntBASIC12.28□□□□□ -0.44
SRRM4A7MD48 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 AL365209.1-201ENST00000624418 6473 ntBASIC12.28□□□□□ -0.44
SRRM4A7MD48 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SRRM4A7MD48 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.28□□□□□ -0.44
SRRM4A7MD48 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SRRM4A7MD48 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SRRM4A7MD48 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
SRRM4A7MD48 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.27□□□□□ -0.44
SRRM4A7MD48 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.27□□□□□ -0.44
SRRM4A7MD48 AC015656.1-201ENST00000624209 3578 ntBASIC12.27□□□□□ -0.44
SRRM4A7MD48 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SRRM4A7MD48 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.27□□□□□ -0.44
SRRM4A7MD48 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SRRM4A7MD48 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 AL138799.1-201ENST00000448213 1675 ntBASIC12.27□□□□□ -0.45
SRRM4A7MD48 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 AC092183.1-201ENST00000469884 875 ntBASIC12.27□□□□□ -0.45
SRRM4A7MD48 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 AL049840.4-201ENST00000602422 811 ntBASIC12.27□□□□□ -0.45
SRRM4A7MD48 GPALPP1-207ENST00000611650 899 ntBASIC12.27□□□□□ -0.45
SRRM4A7MD48 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 AC093525.8-201ENST00000624099 1342 ntBASIC12.27□□□□□ -0.45
SRRM4A7MD48 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.27□□□□□ -0.45
SRRM4A7MD48 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SRRM4A7MD48 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms