Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 AC007967.2-201ENST00000432613 625 ntBASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 KRT18P2-201ENST00000447938 1258 ntBASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 AC074386.1-202ENST00000463561 864 ntBASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 AC112191.1-201ENST00000523689 701 ntBASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 COL6A4P2-202ENST00000504443 2753 ntBASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 REXO1L4P-201ENST00000605109 1937 ntBASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 IGHV3-22-201ENST00000520721 359 ntBASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 AC008267.7-201ENST00000624570 1194 ntBASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 MST1P2-201ENST00000457982 2291 ntBASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
MEIS3P1A6NDR6 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms