Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 AC124283.3-201ENST00000570869 594 ntBASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC162PA2VCL2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 ELK1P1-201ENST00000485699 580 ntBASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 SPDYE22P-201ENST00000582158 798 ntBASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 TMEM261P1-201ENST00000604899 340 ntBASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 AC008494.3-201ENST00000606615 944 ntBASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC162PA2VCL2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms