Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TRGV1A0A0A0MS02 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 TSSK5P-201ENST00000423978 907 ntBASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 AC009477.1-201ENST00000452936 217 ntBASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 TET3-201ENST00000305799 5174 ntTSL 5 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRGV1A0A0A0MS02 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 INTS4P1-203ENST00000641008 3683 ntBASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 RFPL4AP1-201ENST00000530883 850 ntBASIC11.1□□□□□ -0.63
TRGV1A0A0A0MS02 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms