Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 RAN-210ENST00000541630 1475 ntTSL 2 BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SHANK2Q9UPX8 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 MIR1227-201ENST00000408484 88 ntBASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 TSPY25P-201ENST00000429463 745 ntBASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 POU5F1P2-201ENST00000521750 823 ntBASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 AC026803.1-201ENST00000569130 274 ntBASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 R3HDM2P2-201ENST00000401880 2116 ntBASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 AL109954.1-202ENST00000564051 2148 ntBASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 STK26-204ENST00000481105 1835 ntTSL 2 BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SHANK2Q9UPX8 FAM90A2P-201ENST00000511144 1395 ntBASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 FAM90A25P-201ENST00000528404 1395 ntBASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 PFN2-202ENST00000423691 911 ntTSL 2 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 PPOX-204ENST00000462866 473 ntTSL 5 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 CMC2-224ENST00000630396 481 ntTSL 5 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 CASP16P-204ENST00000635032 809 ntBASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 AL136172.1-201ENST00000598590 1394 ntBASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 SERF2-206ENST00000409291 807 ntTSL 3 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SHANK2Q9UPX8 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms