Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNPO2Q9UMS6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 TUBBP5-203ENST00000508529 1334 ntBASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 RNMTL1P1-201ENST00000454103 560 ntBASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 HIST2H2BC-201ENST00000498492 580 ntBASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 AC244394.1-201ENST00000435000 1665 ntBASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 CROCCP1-201ENST00000426910 5675 ntBASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SYNPO2Q9UMS6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 AC011742.3-201ENST00000439053 820 ntBASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 CICP12-201ENST00000455801 843 ntBASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 AL132994.2-201ENST00000603120 687 ntBASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 MIR6720-201ENST00000611664 98 ntBASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 Z98259.2-201ENST00000641583 609 ntBASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 CICP6-201ENST00000457191 2729 ntBASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNPO2Q9UMS6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 AL008718.2-201ENST00000609206 1313 ntBASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms