Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPA4Q9UI42 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPA4Q9UI42 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPA4Q9UI42 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPA4Q9UI42 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPA4Q9UI42 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 AC012362.1-201ENST00000434906 739 ntBASIC17.12■□□□□ 0.33
CPA4Q9UI42 IGHV3-37-201ENST00000518544 340 ntBASIC17.12■□□□□ 0.33
CPA4Q9UI42 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 RPL17P45-201ENST00000586289 509 ntBASIC17.12■□□□□ 0.33
CPA4Q9UI42 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 CICP13-201ENST00000422015 2789 ntBASIC17.12■□□□□ 0.33
CPA4Q9UI42 FRMPD2B-201ENST00000431305 1347 ntBASIC17.12■□□□□ 0.33
CPA4Q9UI42 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPA4Q9UI42 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPA4Q9UI42 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPA4Q9UI42 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPA4Q9UI42 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.12■□□□□ 0.33
CPA4Q9UI42 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.11■□□□□ 0.33
CPA4Q9UI42 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.11■□□□□ 0.33
CPA4Q9UI42 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.11■□□□□ 0.33
CPA4Q9UI42 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPA4Q9UI42 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.11■□□□□ 0.33
CPA4Q9UI42 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPA4Q9UI42 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.11■□□□□ 0.33
CPA4Q9UI42 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.11■□□□□ 0.33
CPA4Q9UI42 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.11■□□□□ 0.33
CPA4Q9UI42 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CPA4Q9UI42 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.11■□□□□ 0.33
CPA4Q9UI42 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.11■□□□□ 0.33
CPA4Q9UI42 AC005632.3-201ENST00000605544 308 ntBASIC17.11■□□□□ 0.33
CPA4Q9UI42 AC127024.7-201ENST00000625101 200 ntBASIC17.11■□□□□ 0.33
CPA4Q9UI42 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CPA4Q9UI42 AL138725.1-201ENST00000407347 1314 ntBASIC17.11■□□□□ 0.33
CPA4Q9UI42 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC17.11■□□□□ 0.33
CPA4Q9UI42 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CPA4Q9UI42 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPA4Q9UI42 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPA4Q9UI42 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 AC015909.3-201ENST00000572855 1794 ntBASIC17.1■□□□□ 0.33
CPA4Q9UI42 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.1■□□□□ 0.33
CPA4Q9UI42 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.1■□□□□ 0.33
CPA4Q9UI42 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.1■□□□□ 0.33
CPA4Q9UI42 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CPA4Q9UI42 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.1■□□□□ 0.33
CPA4Q9UI42 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.1■□□□□ 0.33
CPA4Q9UI42 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17.1■□□□□ 0.33
CPA4Q9UI42 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.1■□□□□ 0.33
CPA4Q9UI42 LINC01783-202ENST00000614408 828 ntBASIC17.1■□□□□ 0.33
CPA4Q9UI42 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.1■□□□□ 0.33
CPA4Q9UI42 BX284668.2-205ENST00000619677 828 ntBASIC17.1■□□□□ 0.33
CPA4Q9UI42 AL161773.1-201ENST00000624845 863 ntBASIC17.1■□□□□ 0.33
CPA4Q9UI42 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.1■□□□□ 0.33
CPA4Q9UI42 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.1■□□□□ 0.33
CPA4Q9UI42 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPA4Q9UI42 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CPA4Q9UI42 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms