Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 PCDHA1-201ENST00000378133 2726 ntBASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 TLE1P1-201ENST00000422965 589 ntBASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 AC012441.2-201ENST00000444843 739 ntBASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 AC020658.6-201ENST00000623564 1870 ntBASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HOXC10Q9NYD6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 AC087481.3-201ENST00000602886 1894 ntBASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 RN7SKP214-201ENST00000364208 315 ntBASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 AC006335.1-201ENST00000445200 547 ntBASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 AP000346.4-201ENST00000614827 381 ntBASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 AC006058.4-201ENST00000624016 1670 ntBASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 LILRP1-201ENST00000444199 1370 ntBASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC10Q9NYD6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 HINT2P1-201ENST00000419438 481 ntBASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 AC134698.3-201ENST00000523880 214 ntBASIC17.24■□□□□ 0.35
HOXC10Q9NYD6 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms