Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 AC007389.4-201ENST00000454674 793 ntBASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 AC008735.3-201ENST00000596646 500 ntBASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 AC105233.6-201ENST00000642093 218 ntBASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 AC007292.2-201ENST00000593524 1812 ntBASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 AC007686.3-201ENST00000619017 3487 ntBASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 AL512384.1-201ENST00000406683 331 ntBASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 NME2P1-201ENST00000426182 414 ntBASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 COX20P2-201ENST00000452636 358 ntBASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 CU639417.3-201ENST00000624240 1404 ntBASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
BLOC1S4Q9NUP1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.83■□□□□ 0.29
BLOC1S4Q9NUP1 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
BLOC1S4Q9NUP1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
BLOC1S4Q9NUP1 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
BLOC1S4Q9NUP1 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
BLOC1S4Q9NUP1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
BLOC1S4Q9NUP1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
BLOC1S4Q9NUP1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
BLOC1S4Q9NUP1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.83■□□□□ 0.29
BLOC1S4Q9NUP1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms