Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 KRT8P14-201ENST00000414254 1442 ntBASIC16.11■□□□□ 0.17
CYLDQ9NQC7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 MSTO2P-201ENST00000314835 1709 ntBASIC16.11■□□□□ 0.17
CYLDQ9NQC7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.11■□□□□ 0.17
CYLDQ9NQC7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 AP001582.1-201ENST00000525856 295 ntBASIC16.11■□□□□ 0.17
CYLDQ9NQC7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 LINC01101-201ENST00000622953 1884 ntBASIC16.11■□□□□ 0.17
CYLDQ9NQC7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 AC134312.5-201ENST00000568031 1313 ntBASIC16.11■□□□□ 0.17
CYLDQ9NQC7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.11■□□□□ 0.17
CYLDQ9NQC7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYLDQ9NQC7 REXO1L2P-201ENST00000425429 2069 ntBASIC16.1■□□□□ 0.17
CYLDQ9NQC7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 AP002414.2-201ENST00000591780 3365 ntBASIC16.1■□□□□ 0.17
CYLDQ9NQC7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 CICP23-201ENST00000605013 2741 ntBASIC16.1■□□□□ 0.17
CYLDQ9NQC7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 AC092933.1-201ENST00000393644 945 ntBASIC16.1■□□□□ 0.17
CYLDQ9NQC7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 MIR1909-201ENST00000411312 80 ntBASIC16.1■□□□□ 0.17
CYLDQ9NQC7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 HLA-K-203ENST00000430151 1046 ntBASIC16.1■□□□□ 0.17
CYLDQ9NQC7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 AC022210.1-201ENST00000449856 793 ntBASIC16.1■□□□□ 0.17
CYLDQ9NQC7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CYLDQ9NQC7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms