Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.24■□□□□ 0.03
TM9SF3Q9HD45 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.24■□□□□ 0.03
TM9SF3Q9HD45 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
TM9SF3Q9HD45 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
TM9SF3Q9HD45 EEF1DP1-201ENST00000585891 896 ntBASIC15.24■□□□□ 0.03
TM9SF3Q9HD45 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF3Q9HD45 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.24■□□□□ 0.03
TM9SF3Q9HD45 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF3Q9HD45 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF3Q9HD45 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF3Q9HD45 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.24■□□□□ 0.03
TM9SF3Q9HD45 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF3Q9HD45 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.24■□□□□ 0.03
TM9SF3Q9HD45 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF3Q9HD45 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF3Q9HD45 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 AC020658.6-201ENST00000623564 1870 ntBASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 TPM3P8-201ENST00000330554 643 ntBASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 RPSAP36-202ENST00000494591 1261 ntBASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 RN7SL48P-201ENST00000579283 293 ntBASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 AC148477.4-201ENST00000613430 1793 ntBASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
TM9SF3Q9HD45 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 AL354989.2-201ENST00000435838 1540 ntBASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 AC015818.8-201ENST00000587907 1519 ntBASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 CALR4P-201ENST00000431943 946 ntBASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms