Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 CNN2P2-201ENST00000443536 909 ntBASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 CNN2P3-201ENST00000450201 906 ntBASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 HLA-J-203ENST00000494367 1087 ntBASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 ZNF890P-202ENST00000530367 1156 ntBASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 AC000095.1-201ENST00000603208 874 ntBASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 TEX28P1-201ENST00000613479 1221 ntBASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 TEX28P2-201ENST00000617764 1221 ntBASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 AL136317.3-201ENST00000618497 906 ntBASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 AC015656.1-201ENST00000624209 3578 ntBASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 AP000845.1-201ENST00000581677 2131 ntBASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR2J2Q9GZM3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
POLR2J2Q9GZM3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 KRT18P64-201ENST00000434946 1219 ntBASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR2J2Q9GZM3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 REXO1L4P-201ENST00000605109 1937 ntBASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms