Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 OR2I1P-210ENST00000642037 4691 ntBASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 MIR1909-201ENST00000411312 80 ntBASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 C2orf27AP3-201ENST00000434123 579 ntBASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 AC022210.1-201ENST00000449856 793 ntBASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 AC104989.1-201ENST00000519711 778 ntBASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 AP005482.1-201ENST00000563722 1273 ntBASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 AC133552.6-201ENST00000613406 534 ntBASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 AL354718.3-201ENST00000616414 581 ntBASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 MIR6752-201ENST00000618442 71 ntBASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 CR382287.1-201ENST00000623954 586 ntBASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 MSTO2P-201ENST00000314835 1709 ntBASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSBP3Q9BWW4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms