Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
HDHD3Q9BSH5 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 SERBP1P3-201ENST00000459980 809 ntBASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 AL928921.2-201ENST00000641325 2442 ntBASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
HDHD3Q9BSH5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 AC007787.1-201ENST00000588095 1583 ntBASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 AC104457.1-201ENST00000401024 814 ntBASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 KRT18P43-201ENST00000469825 1281 ntBASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 AL512361.1-201ENST00000554200 418 ntBASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 AP001059.3-201ENST00000619053 235 ntBASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 AC138969.3-201ENST00000546612 1459 ntBASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 AC138932.2-201ENST00000548268 1459 ntBASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 AC126755.4-201ENST00000549796 1459 ntBASIC12.9□□□□□ -0.34
HDHD3Q9BSH5 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms