Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 AP001282.1-201ENST00000531301 1499 ntBASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 COX20P2-201ENST00000452636 358 ntBASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
TUBA1CQ9BQE3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.46□□□□□ -0.1
TUBA1CQ9BQE3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TUBA1CQ9BQE3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TUBA1CQ9BQE3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.46□□□□□ -0.1
TUBA1CQ9BQE3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TUBA1CQ9BQE3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TUBA1CQ9BQE3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.46□□□□□ -0.1
TUBA1CQ9BQE3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TUBA1CQ9BQE3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TUBA1CQ9BQE3 KRT8P12-202ENST00000472924 1397 ntBASIC14.46□□□□□ -0.1
TUBA1CQ9BQE3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TUBA1CQ9BQE3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
TUBA1CQ9BQE3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
TUBA1CQ9BQE3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 SPDYE17-201ENST00000412399 783 ntBASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 SERBP1P3-201ENST00000459980 809 ntBASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 RN7SL618P-201ENST00000477850 296 ntBASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 AL512361.1-201ENST00000554200 418 ntBASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 AC008738.7-201ENST00000609744 511 ntBASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 AC009118.2-201ENST00000613275 655 ntBASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1CQ9BQE3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TUBA1CQ9BQE3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1CQ9BQE3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1CQ9BQE3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1CQ9BQE3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TUBA1CQ9BQE3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1CQ9BQE3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
TUBA1CQ9BQE3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TUBA1CQ9BQE3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1CQ9BQE3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1CQ9BQE3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms