Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SMOQ99835 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.89■□□□□ 0.13
SMOQ99835 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SMOQ99835 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.89■□□□□ 0.13
SMOQ99835 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMOQ99835 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.88■□□□□ 0.13
SMOQ99835 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.88■□□□□ 0.13
SMOQ99835 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.88■□□□□ 0.13
SMOQ99835 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SMOQ99835 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.88■□□□□ 0.13
SMOQ99835 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
SMOQ99835 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 FAM21FP-201ENST00000426241 1131 ntBASIC15.88■□□□□ 0.13
SMOQ99835 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.88■□□□□ 0.13
SMOQ99835 YBX1P6-201ENST00000442962 1002 ntBASIC15.88■□□□□ 0.13
SMOQ99835 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SMOQ99835 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.88■□□□□ 0.13
SMOQ99835 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.88■□□□□ 0.13
SMOQ99835 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.88■□□□□ 0.13
SMOQ99835 AC009542.2-202ENST00000619004 1067 ntBASIC15.88■□□□□ 0.13
SMOQ99835 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.88■□□□□ 0.13
SMOQ99835 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.88■□□□□ 0.13
SMOQ99835 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.88■□□□□ 0.13
SMOQ99835 INE2-201ENST00000630399 1874 ntBASIC15.88■□□□□ 0.13
SMOQ99835 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.88■□□□□ 0.13
SMOQ99835 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.88■□□□□ 0.13
SMOQ99835 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.88■□□□□ 0.13
SMOQ99835 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.88■□□□□ 0.13
SMOQ99835 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.88■□□□□ 0.13
SMOQ99835 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMOQ99835 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SMOQ99835 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SMOQ99835 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMOQ99835 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.87■□□□□ 0.13
SMOQ99835 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMOQ99835 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMOQ99835 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMOQ99835 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMOQ99835 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMOQ99835 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMOQ99835 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SMOQ99835 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.87■□□□□ 0.13
SMOQ99835 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.87■□□□□ 0.13
SMOQ99835 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.87■□□□□ 0.13
SMOQ99835 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SMOQ99835 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SMOQ99835 CNN2P10-201ENST00000443067 918 ntBASIC15.87■□□□□ 0.13
SMOQ99835 COX5BP1-201ENST00000507622 393 ntBASIC15.87■□□□□ 0.13
SMOQ99835 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
SMOQ99835 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.87■□□□□ 0.13
SMOQ99835 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.87■□□□□ 0.13
SMOQ99835 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.87■□□□□ 0.13
SMOQ99835 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.87■□□□□ 0.13
SMOQ99835 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.87■□□□□ 0.13
SMOQ99835 AC073413.1-201ENST00000603927 732 ntBASIC15.87■□□□□ 0.13
SMOQ99835 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
SMOQ99835 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.87■□□□□ 0.13
SMOQ99835 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMOQ99835 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.87■□□□□ 0.13
SMOQ99835 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SMOQ99835 FKBP4P6-201ENST00000457486 1332 ntBASIC15.87■□□□□ 0.13
SMOQ99835 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMOQ99835 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SMOQ99835 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMOQ99835 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMOQ99835 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.86■□□□□ 0.13
SMOQ99835 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms