Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC10.13□□□□□ -0.79
LITAFQ99732 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC10.13□□□□□ -0.79
LITAFQ99732 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC10.13□□□□□ -0.79
LITAFQ99732 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
LITAFQ99732 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC10.13□□□□□ -0.79
LITAFQ99732 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC10.13□□□□□ -0.79
LITAFQ99732 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC10.13□□□□□ -0.79
LITAFQ99732 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC10.13□□□□□ -0.79
LITAFQ99732 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
LITAFQ99732 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC10.13□□□□□ -0.79
LITAFQ99732 RPS29-206ENST00000557111 488 ntTSL 2 BASIC10.13□□□□□ -0.79
LITAFQ99732 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC10.13□□□□□ -0.79
LITAFQ99732 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC10.13□□□□□ -0.79
LITAFQ99732 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
LITAFQ99732 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.13□□□□□ -0.79
LITAFQ99732 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LITAFQ99732 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LITAFQ99732 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
LITAFQ99732 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LITAFQ99732 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
LITAFQ99732 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
LITAFQ99732 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LITAFQ99732 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LITAFQ99732 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LITAFQ99732 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC10.13□□□□□ -0.79
LITAFQ99732 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LITAFQ99732 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LITAFQ99732 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
LITAFQ99732 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
LITAFQ99732 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LITAFQ99732 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
LITAFQ99732 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC10.12□□□□□ -0.79
LITAFQ99732 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
LITAFQ99732 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC10.12□□□□□ -0.79
LITAFQ99732 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
LITAFQ99732 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC10.12□□□□□ -0.79
LITAFQ99732 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 SRC-202ENST00000373558 4304 ntTSL 5 BASIC10.12□□□□□ -0.79
LITAFQ99732 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC10.12□□□□□ -0.79
LITAFQ99732 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
LITAFQ99732 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 HIST2H3DP1-201ENST00000401004 416 ntBASIC10.12□□□□□ -0.79
LITAFQ99732 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC10.12□□□□□ -0.79
LITAFQ99732 PCED1CP-201ENST00000419887 785 ntBASIC10.12□□□□□ -0.79
LITAFQ99732 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 RNA5SP410-201ENST00000516285 106 ntBASIC10.12□□□□□ -0.79
LITAFQ99732 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC10.12□□□□□ -0.79
LITAFQ99732 MAL2-202ENST00000531508 892 ntTSL 3 BASIC10.12□□□□□ -0.79
LITAFQ99732 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC10.12□□□□□ -0.79
LITAFQ99732 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.12□□□□□ -0.79
LITAFQ99732 AC015910.1-201ENST00000579400 975 ntBASIC10.12□□□□□ -0.79
LITAFQ99732 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC10.12□□□□□ -0.79
LITAFQ99732 SPIB-207ENST00000597855 564 ntTSL 4 BASIC10.12□□□□□ -0.79
LITAFQ99732 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC10.12□□□□□ -0.79
LITAFQ99732 AC092119.3-201ENST00000612618 583 ntBASIC10.12□□□□□ -0.79
LITAFQ99732 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
LITAFQ99732 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
LITAFQ99732 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LITAFQ99732 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms