Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.36■□□□□ 0.05
NDNQ99608 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.36■□□□□ 0.05
NDNQ99608 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.36■□□□□ 0.05
NDNQ99608 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.36■□□□□ 0.05
NDNQ99608 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NDNQ99608 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.36■□□□□ 0.05
NDNQ99608 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NDNQ99608 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDNQ99608 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDNQ99608 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.36■□□□□ 0.05
NDNQ99608 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
NDNQ99608 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NDNQ99608 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
NDNQ99608 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDNQ99608 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDNQ99608 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDNQ99608 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NDNQ99608 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.35■□□□□ 0.05
NDNQ99608 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NDNQ99608 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NDNQ99608 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 REXO1L4P-201ENST00000605109 1937 ntBASIC15.35■□□□□ 0.05
NDNQ99608 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NDNQ99608 AC138969.3-201ENST00000546612 1459 ntBASIC15.35■□□□□ 0.05
NDNQ99608 AC138932.2-201ENST00000548268 1459 ntBASIC15.35■□□□□ 0.05
NDNQ99608 AC126755.4-201ENST00000549796 1459 ntBASIC15.35■□□□□ 0.05
NDNQ99608 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NDNQ99608 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.35■□□□□ 0.05
NDNQ99608 MIR600HG-201ENST00000449175 5984 ntBASIC15.35■□□□□ 0.05
NDNQ99608 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.35■□□□□ 0.05
NDNQ99608 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NDNQ99608 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.35■□□□□ 0.05
NDNQ99608 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NDNQ99608 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 SPDYE18-201ENST00000510091 1050 ntBASIC15.35■□□□□ 0.05
NDNQ99608 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.35■□□□□ 0.05
NDNQ99608 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.35■□□□□ 0.05
NDNQ99608 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.35■□□□□ 0.05
NDNQ99608 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
NDNQ99608 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.35■□□□□ 0.05
NDNQ99608 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.35■□□□□ 0.05
NDNQ99608 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NDNQ99608 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.35■□□□□ 0.05
NDNQ99608 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
NDNQ99608 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDNQ99608 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.35■□□□□ 0.05
NDNQ99608 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.34■□□□□ 0.05
NDNQ99608 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDNQ99608 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDNQ99608 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDNQ99608 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
NDNQ99608 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDNQ99608 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.34■□□□□ 0.05
NDNQ99608 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDNQ99608 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDNQ99608 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDNQ99608 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NDNQ99608 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NDNQ99608 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDNQ99608 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.34■□□□□ 0.05
NDNQ99608 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDNQ99608 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NDNQ99608 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NDNQ99608 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDNQ99608 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDNQ99608 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NDNQ99608 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDNQ99608 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NDNQ99608 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.34■□□□□ 0.05
NDNQ99608 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.34■□□□□ 0.05
NDNQ99608 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.34■□□□□ 0.05
NDNQ99608 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.34■□□□□ 0.05
NDNQ99608 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.34■□□□□ 0.05
NDNQ99608 AC009477.1-201ENST00000452936 217 ntBASIC15.34■□□□□ 0.05
NDNQ99608 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NDNQ99608 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.34■□□□□ 0.05
NDNQ99608 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDNQ99608 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
NDNQ99608 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.34■□□□□ 0.05
NDNQ99608 TIMM17BP1-201ENST00000545713 516 ntBASIC15.34■□□□□ 0.05
NDNQ99608 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
NDNQ99608 AC009407.1-201ENST00000568958 598 ntBASIC15.34■□□□□ 0.05
NDNQ99608 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
NDNQ99608 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.34■□□□□ 0.05
NDNQ99608 AC106028.4-201ENST00000614509 607 ntBASIC15.34■□□□□ 0.05
NDNQ99608 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms