Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 UPK3BP1-201ENST00000428678 509 ntBASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 TOB2P1-201ENST00000469761 992 ntBASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 AC022447.6-201ENST00000515522 438 ntBASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 AC020658.7-201ENST00000624274 2442 ntBASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB3IPQ96QF0 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 INE2-201ENST00000630399 1874 ntBASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 AC007787.1-201ENST00000588095 1583 ntBASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 LINC00265-3P-201ENST00000447588 903 ntBASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 AL591684.3-201ENST00000605187 298 ntBASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3IPQ96QF0 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 AC114271.1-201ENST00000612689 2813 ntBASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 AC012508.2-201ENST00000567613 1472 ntBASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 RPS15P9-201ENST00000494093 319 ntBASIC14.9□□□□□ -0.02
RAB3IPQ96QF0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms