Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 VDAC1P7-201ENST00000462417 847 ntBASIC16.13■□□□□ 0.17
TRIM11Q96F44 AC093214.1-201ENST00000511688 1107 ntBASIC16.13■□□□□ 0.17
TRIM11Q96F44 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 AL390955.2-201ENST00000603032 514 ntBASIC16.13■□□□□ 0.17
TRIM11Q96F44 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM11Q96F44 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM11Q96F44 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 AL158070.2-201ENST00000623713 1621 ntBASIC16.12■□□□□ 0.17
TRIM11Q96F44 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 AL009178.2-201ENST00000597278 2719 ntBASIC16.12■□□□□ 0.17
TRIM11Q96F44 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 MRPS18AP1-201ENST00000414458 589 ntBASIC16.12■□□□□ 0.17
TRIM11Q96F44 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 AC093004.1-201ENST00000508850 424 ntBASIC16.12■□□□□ 0.17
TRIM11Q96F44 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 AC023310.3-201ENST00000557027 670 ntBASIC16.12■□□□□ 0.17
TRIM11Q96F44 AC100756.1-201ENST00000562736 682 ntBASIC16.12■□□□□ 0.17
TRIM11Q96F44 AC138749.3-201ENST00000567691 622 ntBASIC16.12■□□□□ 0.17
TRIM11Q96F44 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 AC116165.1-201ENST00000611806 668 ntBASIC16.12■□□□□ 0.17
TRIM11Q96F44 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM11Q96F44 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRIM11Q96F44 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM11Q96F44 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 AC140479.7-201ENST00000636301 2332 ntBASIC16.11■□□□□ 0.17
TRIM11Q96F44 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM11Q96F44 SPDYE19P-201ENST00000338590 713 ntBASIC16.11■□□□□ 0.17
TRIM11Q96F44 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRIM11Q96F44 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM11Q96F44 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM11Q96F44 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM11Q96F44 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM11Q96F44 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM11Q96F44 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms