Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 NUS1P3-201ENST00000423502 862 ntBASIC16.18■□□□□ 0.18
DDX1Q92499 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.18■□□□□ 0.18
DDX1Q92499 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.18■□□□□ 0.18
DDX1Q92499 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.18■□□□□ 0.18
DDX1Q92499 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 AC015936.2-201ENST00000593177 259 ntBASIC16.18■□□□□ 0.18
DDX1Q92499 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.18■□□□□ 0.18
DDX1Q92499 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
DDX1Q92499 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 AC007191.1-201ENST00000623179 2995 ntBASIC16.18■□□□□ 0.18
DDX1Q92499 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
DDX1Q92499 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.18■□□□□ 0.18
DDX1Q92499 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
DDX1Q92499 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.18■□□□□ 0.18
DDX1Q92499 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.18■□□□□ 0.18
DDX1Q92499 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DDX1Q92499 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
DDX1Q92499 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DDX1Q92499 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
DDX1Q92499 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.17■□□□□ 0.18
DDX1Q92499 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
DDX1Q92499 AC005912.2-201ENST00000619492 2400 ntBASIC16.17■□□□□ 0.18
DDX1Q92499 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DDX1Q92499 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
DDX1Q92499 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.17■□□□□ 0.18
DDX1Q92499 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DDX1Q92499 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
DDX1Q92499 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DDX1Q92499 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
DDX1Q92499 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.17■□□□□ 0.18
DDX1Q92499 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.17■□□□□ 0.18
DDX1Q92499 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
DDX1Q92499 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DDX1Q92499 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
DDX1Q92499 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
DDX1Q92499 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.17■□□□□ 0.18
DDX1Q92499 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.17■□□□□ 0.18
DDX1Q92499 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.17■□□□□ 0.18
DDX1Q92499 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
DDX1Q92499 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DDX1Q92499 AC119751.2-201ENST00000504529 210 ntBASIC16.17■□□□□ 0.18
DDX1Q92499 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
DDX1Q92499 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.17■□□□□ 0.18
DDX1Q92499 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.17■□□□□ 0.18
DDX1Q92499 WASH4P-201ENST00000564273 1246 ntBASIC16.17■□□□□ 0.18
DDX1Q92499 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.17■□□□□ 0.18
DDX1Q92499 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DDX1Q92499 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.17■□□□□ 0.18
DDX1Q92499 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.17■□□□□ 0.18
DDX1Q92499 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.17■□□□□ 0.18
DDX1Q92499 AC005252.2-201ENST00000624630 1141 ntBASIC16.17■□□□□ 0.18
DDX1Q92499 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DDX1Q92499 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DDX1Q92499 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DDX1Q92499 KRT8P14-201ENST00000414254 1442 ntBASIC16.17■□□□□ 0.18
DDX1Q92499 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DDX1Q92499 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.17■□□□□ 0.18
DDX1Q92499 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DDX1Q92499 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DDX1Q92499 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
DDX1Q92499 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DDX1Q92499 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.17■□□□□ 0.18
DDX1Q92499 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.17■□□□□ 0.18
DDX1Q92499 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
DDX1Q92499 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DDX1Q92499 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DDX1Q92499 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
DDX1Q92499 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
DDX1Q92499 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.16■□□□□ 0.18
DDX1Q92499 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DDX1Q92499 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DDX1Q92499 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
DDX1Q92499 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.16■□□□□ 0.18
DDX1Q92499 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.16■□□□□ 0.18
DDX1Q92499 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.16■□□□□ 0.18
DDX1Q92499 RNU1-114P-201ENST00000365297 166 ntBASIC16.16■□□□□ 0.18
DDX1Q92499 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
DDX1Q92499 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
DDX1Q92499 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DDX1Q92499 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.16■□□□□ 0.18
DDX1Q92499 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.16■□□□□ 0.18
DDX1Q92499 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.16■□□□□ 0.18
DDX1Q92499 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
DDX1Q92499 MIR6775-201ENST00000617557 69 ntBASIC16.16■□□□□ 0.18
DDX1Q92499 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
DDX1Q92499 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
DDX1Q92499 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DDX1Q92499 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
DDX1Q92499 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.16■□□□□ 0.18
DDX1Q92499 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
DDX1Q92499 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
DDX1Q92499 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DDX1Q92499 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms