Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCNB3Q8WWL7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC23.12■■□□□ 1.29
CCNB3Q8WWL7 MARK2P5-201ENST00000507649 634 ntBASIC23.12■■□□□ 1.29
CCNB3Q8WWL7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC23.12■■□□□ 1.29
CCNB3Q8WWL7 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCNB3Q8WWL7 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC23.12■■□□□ 1.29
CCNB3Q8WWL7 AC100757.4-201ENST00000626934 759 ntBASIC23.12■■□□□ 1.29
CCNB3Q8WWL7 AC004923.1-202ENST00000642106 209 ntBASIC23.12■■□□□ 1.29
CCNB3Q8WWL7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCNB3Q8WWL7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 PTPA-217ENST00000434095 870 ntTSL 2 BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCNB3Q8WWL7 AC023157.3-201ENST00000619086 2088 ntBASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 SHC1P1-201ENST00000425230 1745 ntBASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 AL133466.1-201ENST00000447582 150 ntBASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCNB3Q8WWL7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 ZBED1P1-201ENST00000502364 1930 ntBASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 E2F3P2-201ENST00000447755 1422 ntBASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 SLC16A6P1-201ENST00000413214 1059 ntBASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 HINT2P1-201ENST00000419438 481 ntBASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 MSRA-203ENST00000441698 788 ntTSL 2 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 NUP210P1-202ENST00000504322 710 ntBASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 HNRNPA1P36-201ENST00000521313 955 ntBASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 ACE3P-201ENST00000423435 1973 ntBASIC23.09■■□□□ 1.29
CCNB3Q8WWL7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms