Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCER1Q8TC90 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC22.8■■□□□ 1.24
CCER1Q8TC90 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC22.8■■□□□ 1.24
CCER1Q8TC90 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC22.8■■□□□ 1.24
CCER1Q8TC90 VPS29-207ENST00000549970 818 ntTSL 3 BASIC22.8■■□□□ 1.24
CCER1Q8TC90 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC22.8■■□□□ 1.24
CCER1Q8TC90 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC22.8■■□□□ 1.24
CCER1Q8TC90 AL596442.2-201ENST00000610240 980 ntBASIC22.8■■□□□ 1.24
CCER1Q8TC90 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCER1Q8TC90 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC22.8■■□□□ 1.24
CCER1Q8TC90 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CCER1Q8TC90 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC22.8■■□□□ 1.24
CCER1Q8TC90 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCER1Q8TC90 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC22.8■■□□□ 1.24
CCER1Q8TC90 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CCER1Q8TC90 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCER1Q8TC90 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CCER1Q8TC90 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CCER1Q8TC90 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
CCER1Q8TC90 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CCER1Q8TC90 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCER1Q8TC90 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCER1Q8TC90 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CCER1Q8TC90 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCER1Q8TC90 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCER1Q8TC90 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC22.79■■□□□ 1.24
CCER1Q8TC90 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC22.79■■□□□ 1.24
CCER1Q8TC90 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCER1Q8TC90 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
CCER1Q8TC90 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCER1Q8TC90 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCER1Q8TC90 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC22.79■■□□□ 1.24
CCER1Q8TC90 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
CCER1Q8TC90 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC22.79■■□□□ 1.24
CCER1Q8TC90 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
CCER1Q8TC90 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCER1Q8TC90 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
CCER1Q8TC90 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCER1Q8TC90 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CCER1Q8TC90 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CCER1Q8TC90 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CCER1Q8TC90 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC22.79■■□□□ 1.24
CCER1Q8TC90 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCER1Q8TC90 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC22.78■■□□□ 1.24
CCER1Q8TC90 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC22.78■■□□□ 1.24
CCER1Q8TC90 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC22.78■■□□□ 1.24
CCER1Q8TC90 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCER1Q8TC90 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCER1Q8TC90 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCER1Q8TC90 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCER1Q8TC90 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCER1Q8TC90 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCER1Q8TC90 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCER1Q8TC90 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
CCER1Q8TC90 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCER1Q8TC90 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC22.78■■□□□ 1.24
CCER1Q8TC90 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC22.78■■□□□ 1.24
CCER1Q8TC90 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC22.78■■□□□ 1.24
CCER1Q8TC90 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC22.78■■□□□ 1.24
CCER1Q8TC90 AC092865.5-201ENST00000545435 363 ntBASIC22.78■■□□□ 1.24
CCER1Q8TC90 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC22.78■■□□□ 1.24
CCER1Q8TC90 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC22.78■■□□□ 1.24
CCER1Q8TC90 Z92544.3-201ENST00000624747 417 ntBASIC22.78■■□□□ 1.24
CCER1Q8TC90 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC22.78■■□□□ 1.24
CCER1Q8TC90 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCER1Q8TC90 AC134684.3-201ENST00000641758 218 ntBASIC22.78■■□□□ 1.24
CCER1Q8TC90 KCP-203ENST00000610776 5108 ntTSL 5 BASIC22.78■■□□□ 1.24
CCER1Q8TC90 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC22.78■■□□□ 1.24
CCER1Q8TC90 AC138969.3-201ENST00000546612 1459 ntBASIC22.78■■□□□ 1.24
CCER1Q8TC90 AC138932.2-201ENST00000548268 1459 ntBASIC22.78■■□□□ 1.24
CCER1Q8TC90 AC126755.4-201ENST00000549796 1459 ntBASIC22.78■■□□□ 1.24
CCER1Q8TC90 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCER1Q8TC90 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCER1Q8TC90 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCER1Q8TC90 AL157414.3-201ENST00000624276 1954 ntBASIC22.78■■□□□ 1.24
CCER1Q8TC90 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
CCER1Q8TC90 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCER1Q8TC90 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CCER1Q8TC90 LILRP1-201ENST00000444199 1370 ntBASIC22.77■■□□□ 1.24
CCER1Q8TC90 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC22.77■■□□□ 1.24
CCER1Q8TC90 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCER1Q8TC90 ST20-AS1-201ENST00000560255 4223 ntBASIC22.77■■□□□ 1.24
CCER1Q8TC90 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCER1Q8TC90 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCER1Q8TC90 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CCER1Q8TC90 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CCER1Q8TC90 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CCER1Q8TC90 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC22.77■■□□□ 1.24
CCER1Q8TC90 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC22.77■■□□□ 1.24
CCER1Q8TC90 HLA-J-203ENST00000494367 1087 ntBASIC22.77■■□□□ 1.24
CCER1Q8TC90 AC044860.1-202ENST00000559481 777 ntBASIC22.77■■□□□ 1.24
CCER1Q8TC90 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC22.77■■□□□ 1.24
CCER1Q8TC90 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC22.77■■□□□ 1.24
CCER1Q8TC90 GPR39-203ENST00000622084 900 ntTSL 5 BASIC22.77■■□□□ 1.24
CCER1Q8TC90 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCER1Q8TC90 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCER1Q8TC90 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC22.77■■□□□ 1.24
CCER1Q8TC90 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
CCER1Q8TC90 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCER1Q8TC90 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms