Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 LILRP1-201ENST00000444199 1370 ntBASIC16.34■□□□□ 0.21
BEST2Q8NFU1 AL109954.1-202ENST00000564051 2148 ntBASIC16.34■□□□□ 0.21
BEST2Q8NFU1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.34■□□□□ 0.21
BEST2Q8NFU1 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
BEST2Q8NFU1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.33■□□□□ 0.21
BEST2Q8NFU1 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.33■□□□□ 0.21
BEST2Q8NFU1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BEST2Q8NFU1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BEST2Q8NFU1 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.33■□□□□ 0.21
BEST2Q8NFU1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BEST2Q8NFU1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BEST2Q8NFU1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BEST2Q8NFU1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 MIR1202-201ENST00000408529 83 ntBASIC16.33■□□□□ 0.2
BEST2Q8NFU1 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 AC026434.2-201ENST00000506094 1078 ntBASIC16.33■□□□□ 0.2
BEST2Q8NFU1 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 AC073347.1-201ENST00000421633 2643 ntBASIC16.33■□□□□ 0.2
BEST2Q8NFU1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 AL354989.2-201ENST00000435838 1540 ntBASIC16.33■□□□□ 0.2
BEST2Q8NFU1 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST2Q8NFU1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 MIR1908-201ENST00000410394 80 ntBASIC16.32■□□□□ 0.2
BEST2Q8NFU1 POM121L8P-201ENST00000417732 1281 ntBASIC16.32■□□□□ 0.2
BEST2Q8NFU1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 POM121L9P-203ENST00000441984 1285 ntBASIC16.32■□□□□ 0.2
BEST2Q8NFU1 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST2Q8NFU1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms