Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC148Q8NFR7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 AL512384.1-201ENST00000406683 331 ntBASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 KLF2P2-201ENST00000416807 1039 ntBASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 INE1-201ENST00000456273 945 ntBASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 PTP4A1P2-201ENST00000546033 454 ntBASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 AC005225.4-201ENST00000557330 545 ntBASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 AGAP7P-201ENST00000582299 2062 ntBASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 AGAP14-201ENST00000624701 2060 ntBASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 TCAF2P1-201ENST00000291129 2421 ntBASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC148Q8NFR7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 HLA-K-203ENST00000430151 1046 ntBASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 AC093433.1-201ENST00000458048 571 ntBASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 AC015936.2-201ENST00000593177 259 ntBASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 AC012645.4-201ENST00000610691 1061 ntBASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 RPSAP52-203ENST00000622976 1023 ntBASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 FAM45BP-202ENST00000592932 1624 ntBASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC148Q8NFR7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC148Q8NFR7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms